| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1806 |
|---|
| Symbol | |
|---|
| ID | 8534964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1941753 |
|---|
| End bp | 1942724 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646384188 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| Protein accession | YP_003263676 |
|---|
| Protein GI | 261856393 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.278367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCATG CACGTATCAC CGGTACAGGG AGTTACCTTC CTGAGCGGAT CCTGACGAAT
CAGGATCTGG AAAAGATGGT TGAAACTTCG GACACCTGGA TTCGGGAGCG GACGGGCATC
GAGCAACGTC ATATCGCCGA GAAAGGACAG CTCACGTCCG ACTTGGCCGA GCCGGCGGCG
CGCCGTGCTC TGGAAGCGGC TGGCAAAATC CCGTCTGATG TTGACCTGCT GATCGTGGCG
ACAACAACAC CTGATCGCGT ATTCCCTTCA ACGGCCTGTC TACTGCAGCA GAAACTGGGC
ATTCACGGCT CGCCTGCTTT TGATATTCAG GCAGTCTGCA CGGGCTTTGT GTATGCGTTG
AGTGTGGCAG AGAAATTCAT CAAGACCGGT GCTGCCCGTT GCGCACTGGT CATCGGAGCG
GAAACCCTGT CGCGCATCGT TAACTGGCAG GATCGAGGGA CCTGCGTGCT GTTTGCTGAT
GGTGCCGGTG CGGTCGTGCT CGAAGCCAGC GAAGAGCCCG GAATTATCAG CACCCATATC
CATGCCGATG GGGCGTACGA ATCGTTGCTG ACTACGGTAA AACCCGGGCC CGATGTCGAT
CTGGATAAAC TGGCCGACGG TACGGCGTTC ATTGAAATGC GCGGTAACGA AGTGTTCAAA
ATGGCGGTAA ATACGCTCGG TCGCATCGTC GATGAAACCT TGGATGCCGC CGGGATGTCC
TATGCCGACA TCGACTGGCT GGTACCCCAT CAGGCCAACA TCCGCATCAT TCAGGCAACG
GCACGCAAGC TCGATTTGCC GATGGAACGC GTGGTGGTCA CCGTTAACAA ACACGGCAAT
ACTTCTGCGG CTTCGGTTCC TCTGGCACTG GATACCGCCG TTCGCGATGG ACGCATCAAG
CGTGGCGATA CGATTCTGCT CGAAGCGTTT GGTGGCGGCT TTACCTGGGG TTCGGCACTC
ATCAAGTTCT GA
|
|---|
| Protein sequence | MIHARITGTG SYLPERILTN QDLEKMVETS DTWIRERTGI EQRHIAEKGQ LTSDLAEPAA
RRALEAAGKI PSDVDLLIVA TTTPDRVFPS TACLLQQKLG IHGSPAFDIQ AVCTGFVYAL
SVAEKFIKTG AARCALVIGA ETLSRIVNWQ DRGTCVLFAD GAGAVVLEAS EEPGIISTHI
HADGAYESLL TTVKPGPDVD LDKLADGTAF IEMRGNEVFK MAVNTLGRIV DETLDAAGMS
YADIDWLVPH QANIRIIQAT ARKLDLPMER VVVTVNKHGN TSAASVPLAL DTAVRDGRIK
RGDTILLEAF GGGFTWGSAL IKF
|
|---|
| |