| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1789 |
|---|
| Symbol | |
|---|
| ID | 8534947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1923121 |
|---|
| End bp | 1923945 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646384171 |
|---|
| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
|---|
| Protein accession | YP_003263659 |
|---|
| Protein GI | 261856376 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.760847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTGT GGACTTGGTT TGGTTTGAAA AAAGGCCGTG CAACCACCGG TTGGCCCGAA
TCCGCCGGTT CGGATGGCCA AGAGGGCGTG CTCGGCTTGC CCAAATTAAA TGCTGATCAG
TGCAGCGAAG GCGCCCAAGG CTGCACGAAG TGCGTGACCA GTTGCCCGTC TGAGGCGATT
ACCTTGAATG TTACCGAGGA TCAAGAGCCA CACATCGATT TGGATTATGC CCGCTGCGTC
GGTTGTCAAC TGTGTACCGA AACTTGCCCG AGCGGTGCAT TCAGCCCGTC TAACGATTGG
GCGTTCGCGG TGCGTGATCG CGCCGATTTG TCGCGCTTGG CTCGGCCTGC GACGCCTGAT
AAAAAACTCG AAGAAAAATG GCAAAAATCA TTGGCCGGTT TTGGCCGTAG TTTGCATATC
CGTCATGTGG ATGCCGGTTC CTGCAATGGC TGCGAGAGTG AGATTTCGGC CTTGCTGAAC
CCGTTTTACA ATCTGCATCG TTTGGGGGTT TTCTTCACAC CATCGCCGCG TTTTGCCGAC
TTGTTGCTCG TCACCGGCCC GGTTACCGAA GTGATGCGTG AGCCGTTGCT GCGCACCTTT
GAAGCCATGC CCGAACCGCG TTGGGTAATG GCGCTCGGCA CCTGCGCGAC GGGTGGCGGC
ACGAACGGCG GCGGTTACGC CTGCCATCAG GGTCTGGACG GCATTTTGCC AGTAGATATC
TGGCTGCCGG GTTGCCCGCC GAATCCAGCG GCAATTATCG AAGCGCTGTT GGTTTTGCTT
GATCGCCGAC CTCAGCAAGT TCATGGAGGC CGCCATGACG CCTGA
|
|---|
| Protein sequence | MPLWTWFGLK KGRATTGWPE SAGSDGQEGV LGLPKLNADQ CSEGAQGCTK CVTSCPSEAI
TLNVTEDQEP HIDLDYARCV GCQLCTETCP SGAFSPSNDW AFAVRDRADL SRLARPATPD
KKLEEKWQKS LAGFGRSLHI RHVDAGSCNG CESEISALLN PFYNLHRLGV FFTPSPRFAD
LLLVTGPVTE VMREPLLRTF EAMPEPRWVM ALGTCATGGG TNGGGYACHQ GLDGILPVDI
WLPGCPPNPA AIIEALLVLL DRRPQQVHGG RHDA
|
|---|
| |