Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1773 |
Symbol | |
ID | 8534931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1908360 |
End bp | 1909616 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646384155 |
Product | flagellar hook-basal body protein |
Protein accession | YP_003263643 |
Protein GI | 261856360 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTTA ATACCTCGAT TACGGGGCTG AACGCAGCCC AGAAAGATCT GGATGTGACC AGTAACAATA TCGCCAACGC CAATTCGACC GGGTTTAAGA GCTCGCGTGC GCAGTTTGGC GATATTTACG CCGTGAGCGC TTATGGCAAC AGCAAAACCG CCACAGGGCA GGGCGTTTTA ACCGAGGCCG TCCAACAGCA GTTCACGCAG GGTAGCTTGC AGTTCACGAA CAACTCTTTG GATCTGGCGA TTTCCGGGCA GGGCTTCTTT ACCTTCCAGC CGACGTTGGA CAGTCTGCAA TCGGTGTATT CCCGCGCCGG TGCGCTGGGC GCAAATAAAG ACGGCTTCAT CGTGAATACC AACGGCCAGT ACCTCAAAGC ATTACCGGTG AGTGCCAACG GCACATTGCA ATCCACTTCG CTGGCCAGTG CCAAGCCGAT CCAGTTGCCG GTGGCCGCAG GTGCGCCCAA GGCCACCACT CTGGTGACAC AGTCGTTCAA CCTGCCTGCC AGCGCGACCG TACCCACGGT GACGCCATTC GATACGACGC AGGCGACGCC TGATCCTGCT TCATATACGC AGGCGAATTC GCAGCAAGTT TATGATTCTT TGGGTAATAC CCATACGTTG ACGAGTTATT ACGTCAAGAC CGCCAATCCC AATGAATGGA ATGTGTACTA TCAAGTAGAT ACACAAACAC CTATTCAGGG GCCATCGACG CTGACCTTTG ATGCCAACGG GCAACTGCCG ACCACGCCCG CGCCATTTGC GGTGACGGCC ACGGCCGCCA GCTTGGGCAC CGGCGCGGCG CCCTTGAATA TCAATGTCCA GACTCAAGGC GATTCCACTC AATACAATGC GCCGTTCAAC ATGGCTGCGC AGTCGCAGGA CGGGAATACC ACCGGGCAAT TGACGGGTGT ATCGGTTGGT AGCAATGGCC TGATTCAGGC GAGCTATTCC AATGGTCAGA ATATTCCGCT GGGGATGGTG GCGCTCGCCA ATTTCAGTAA TCCGCAGGGC CTGAAACAGG TTGGCAATAA TTCATGGGCG GAATCGGTCG ATTCGGGCGC GCCCACAGCC GGTCAACCGG GTACCGGCAC CTTCGGTCTG ATTCAGGGCG GCGCACTGGA GCAGTCGAAT GTCGATCTGA CTCAGCAACT GGTGAATCTG ATTACGGCTC AGCGTAACTT CCAGGCCAAT GCGCAAGCGA TTCAGACAGA CAAAACAGCG ACTGATTCTG TGATCAACAT TCGGTAA
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Protein sequence | MSFNTSITGL NAAQKDLDVT SNNIANANST GFKSSRAQFG DIYAVSAYGN SKTATGQGVL TEAVQQQFTQ GSLQFTNNSL DLAISGQGFF TFQPTLDSLQ SVYSRAGALG ANKDGFIVNT NGQYLKALPV SANGTLQSTS LASAKPIQLP VAAGAPKATT LVTQSFNLPA SATVPTVTPF DTTQATPDPA SYTQANSQQV YDSLGNTHTL TSYYVKTANP NEWNVYYQVD TQTPIQGPST LTFDANGQLP TTPAPFAVTA TAASLGTGAA PLNINVQTQG DSTQYNAPFN MAAQSQDGNT TGQLTGVSVG SNGLIQASYS NGQNIPLGMV ALANFSNPQG LKQVGNNSWA ESVDSGAPTA GQPGTGTFGL IQGGALEQSN VDLTQQLVNL ITAQRNFQAN AQAIQTDKTA TDSVINIR
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