Gene Hneap_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1773 
Symbol 
ID8534931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1908360 
End bp1909616 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content56% 
IMG OID646384155 
Productflagellar hook-basal body protein 
Protein accessionYP_003263643 
Protein GI261856360 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTA ATACCTCGAT TACGGGGCTG AACGCAGCCC AGAAAGATCT GGATGTGACC 
AGTAACAATA TCGCCAACGC CAATTCGACC GGGTTTAAGA GCTCGCGTGC GCAGTTTGGC
GATATTTACG CCGTGAGCGC TTATGGCAAC AGCAAAACCG CCACAGGGCA GGGCGTTTTA
ACCGAGGCCG TCCAACAGCA GTTCACGCAG GGTAGCTTGC AGTTCACGAA CAACTCTTTG
GATCTGGCGA TTTCCGGGCA GGGCTTCTTT ACCTTCCAGC CGACGTTGGA CAGTCTGCAA
TCGGTGTATT CCCGCGCCGG TGCGCTGGGC GCAAATAAAG ACGGCTTCAT CGTGAATACC
AACGGCCAGT ACCTCAAAGC ATTACCGGTG AGTGCCAACG GCACATTGCA ATCCACTTCG
CTGGCCAGTG CCAAGCCGAT CCAGTTGCCG GTGGCCGCAG GTGCGCCCAA GGCCACCACT
CTGGTGACAC AGTCGTTCAA CCTGCCTGCC AGCGCGACCG TACCCACGGT GACGCCATTC
GATACGACGC AGGCGACGCC TGATCCTGCT TCATATACGC AGGCGAATTC GCAGCAAGTT
TATGATTCTT TGGGTAATAC CCATACGTTG ACGAGTTATT ACGTCAAGAC CGCCAATCCC
AATGAATGGA ATGTGTACTA TCAAGTAGAT ACACAAACAC CTATTCAGGG GCCATCGACG
CTGACCTTTG ATGCCAACGG GCAACTGCCG ACCACGCCCG CGCCATTTGC GGTGACGGCC
ACGGCCGCCA GCTTGGGCAC CGGCGCGGCG CCCTTGAATA TCAATGTCCA GACTCAAGGC
GATTCCACTC AATACAATGC GCCGTTCAAC ATGGCTGCGC AGTCGCAGGA CGGGAATACC
ACCGGGCAAT TGACGGGTGT ATCGGTTGGT AGCAATGGCC TGATTCAGGC GAGCTATTCC
AATGGTCAGA ATATTCCGCT GGGGATGGTG GCGCTCGCCA ATTTCAGTAA TCCGCAGGGC
CTGAAACAGG TTGGCAATAA TTCATGGGCG GAATCGGTCG ATTCGGGCGC GCCCACAGCC
GGTCAACCGG GTACCGGCAC CTTCGGTCTG ATTCAGGGCG GCGCACTGGA GCAGTCGAAT
GTCGATCTGA CTCAGCAACT GGTGAATCTG ATTACGGCTC AGCGTAACTT CCAGGCCAAT
GCGCAAGCGA TTCAGACAGA CAAAACAGCG ACTGATTCTG TGATCAACAT TCGGTAA
 
Protein sequence
MSFNTSITGL NAAQKDLDVT SNNIANANST GFKSSRAQFG DIYAVSAYGN SKTATGQGVL 
TEAVQQQFTQ GSLQFTNNSL DLAISGQGFF TFQPTLDSLQ SVYSRAGALG ANKDGFIVNT
NGQYLKALPV SANGTLQSTS LASAKPIQLP VAAGAPKATT LVTQSFNLPA SATVPTVTPF
DTTQATPDPA SYTQANSQQV YDSLGNTHTL TSYYVKTANP NEWNVYYQVD TQTPIQGPST
LTFDANGQLP TTPAPFAVTA TAASLGTGAA PLNINVQTQG DSTQYNAPFN MAAQSQDGNT
TGQLTGVSVG SNGLIQASYS NGQNIPLGMV ALANFSNPQG LKQVGNNSWA ESVDSGAPTA
GQPGTGTFGL IQGGALEQSN VDLTQQLVNL ITAQRNFQAN AQAIQTDKTA TDSVINIR