| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1759 |
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| Symbol | |
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| ID | 8534917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1893050 |
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| End bp | 1894102 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646384141 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_003263629 |
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| Protein GI | 261856346 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.172005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CCCAGCCGCC AAATGATGAT CTGCGCATTG AACCCAATCT CGGTGCGGCA
ACCGCACAAC ACACGAACGC GTCGGAAAAG ACGACAGCGG GAGACGATGC CTGGGCGCGC
GAGGCGTTAC TCGATCTTGC CCGCCAAGGC CTGAAAGAAC AACGCAGCGC ACGCCGTTGG
CGGGTATTTT TCCGGCTGAT CAGCCTCGCG TTGGTAATCT GGATCATTGC TTGGATCTCC
CTCAGCGGCG ATCTCGATGA CGACCATGGT GTTGTTATCA AACAGCCATC GGCAGGCATC
ATCGATATCA GCGGGGTGAT TGCCGCAGGG CAAGAAGCGT CCGCGGAGGA AATCATCCCC
GTACTTGAAA AGGCGTTCAA GAACACCCAA ATCAAGGGCA TCGTTCTGCG CATGAACACG
CCGGGCGGCA GCCCCGTTCA ATCTGGCGAA ATCTTTGACG CCATCATGCG ATTGCGCAAG
GAATACCCTG CCAAGCCGGT TTATGCCGTC GTCGAGGATG TATGCGCTTC CGGTGGGTAT
TACATAGCCG CCGCAGCCGA CAAAATTTTT GCAAATCAGG CCTCTCTCGT CGGTTCGATC
GGCGTGCGGA TGGATAGCTT CGGGTTTGTG GACGCCATGC AGAAACTCGG CATCGAAAGC
CGGCTGATTA CTTCGGGTGC CAATAAAGCG ATGCTCGACC CGTTCTCTCC CGAGAATCCA
GCACAGGTGC AATACATGCA AAACCTGCTT GATCAGGTTC ACCAGCAGTT CATTGATGCC
GTGAAAAAAG GCCGAGGCAA ACGACTCGCT AACGACCCCG ACCTGTTCTC CGGCCTGATC
TACACCGGCG CACAGGCACA GAAGAACGGA CTGATCGACG GCCTGGGCAC GGTGCGTAGC
GTGGTCCGAG ATGAGTTGCA CCTGAAAAAT GAAGTCGACC TTACGCCAAG CAAGAGCCCA
TTTGAGGAGC TTCTGGGTAA AACCAGCACG CAAATCAGCC AGTCGCTGAC GAGCCTCTGG
GCGGCAAATC TTGGTCCCAA GCTTTTACCC TAG
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| Protein sequence | MSTTQPPNDD LRIEPNLGAA TAQHTNASEK TTAGDDAWAR EALLDLARQG LKEQRSARRW
RVFFRLISLA LVIWIIAWIS LSGDLDDDHG VVIKQPSAGI IDISGVIAAG QEASAEEIIP
VLEKAFKNTQ IKGIVLRMNT PGGSPVQSGE IFDAIMRLRK EYPAKPVYAV VEDVCASGGY
YIAAAADKIF ANQASLVGSI GVRMDSFGFV DAMQKLGIES RLITSGANKA MLDPFSPENP
AQVQYMQNLL DQVHQQFIDA VKKGRGKRLA NDPDLFSGLI YTGAQAQKNG LIDGLGTVRS
VVRDELHLKN EVDLTPSKSP FEELLGKTST QISQSLTSLW AANLGPKLLP
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