| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1757 |
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| Symbol | |
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| ID | 8534915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1891312 |
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| End bp | 1892352 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646384139 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003263627 |
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| Protein GI | 261856344 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0151064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAC ACCTTAAGGC GCCCTCCGGT CAGCCTATCG AAAAGAAACA ATCCGTGCGC
CGCGTCACTG TCGATGCGCA CTATGCAGGT CAACGCATCG ACAATTTTCT GCTGCGCGAA
TTGGGCGCGA CGCATGGCGA GGTTCCGCGC TCCCTGATTT ATCGCATTCT GCGCACCGGA
GAAGTCCGCG TGAACAGTCA ACGCGCCAAG CCGACCACTC GGCTTGCGAC GGGCGATGAG
GTCCGCATTC CACCACTCAA GCTGCAAAGC CCCTCACAAG AATCGGCGGG CGTGATCTCG
GCGAACTGGC TCGCACGCGC TGCGGACATG ATCGTGTACG AAGACGAAGC CCTGCTGGCC
GTCAACAAAC CTGCTGGCCT TGCCGTCCAC GGCGGCTCGA ACATCCCTTT TGGTCTGATT
GAACTCATGC GCCAACACAC GGGATTGGGC GAAAAACTCG AACTGGCCCA TCGCATTGAT
CGTGACACCA GCGGCCTGTT GATTCTGGCC AAGACCCGCG CCACACTGCA TTCGCTGCAA
ACCCAGTTCC GGCCGGAAGG CCATGCCGAA AAGCAGTATC TGGCCATCGT GCATGGTCAT
TGGCCAGACA AACTCAAACG CGTCGATGCG CCATTGGAAA AATGGCAGGG CGAAGGTGAG
TCGCATCGGG TGCAGGTCAA CCCACAAGGC AAGGAAGCCG TGACCCATTT CGCCGTGCTG
GCCGCCAACA AAAACGCCAC CCTGCTGCGC GCGCAACTTG AAACCGGTCG CACGCATCAG
ATTCGCGTAC ACACCGCGCA CGAGAACCAC CCGATCGTCG GCGATGAAAA ATACGGTCAG
CGCGAATGGG ACAAACGGCT CTTTCCATCC ACTGGCGCCT CGGCCCGACG ACGCCCGCCG
CTACTGCTGC ACGCGTATCG CCTGATGCTG ACGCATCCGC AAACAGAACA ACCACTGCAG
TTGACGGCCC CGATCCCAGA TAAATGGCGT TCGCTGGCAC AACAACTCAA TCTAACGCTG
CCGGAACACG ACCCGAAATG A
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| Protein sequence | MNTHLKAPSG QPIEKKQSVR RVTVDAHYAG QRIDNFLLRE LGATHGEVPR SLIYRILRTG
EVRVNSQRAK PTTRLATGDE VRIPPLKLQS PSQESAGVIS ANWLARAADM IVYEDEALLA
VNKPAGLAVH GGSNIPFGLI ELMRQHTGLG EKLELAHRID RDTSGLLILA KTRATLHSLQ
TQFRPEGHAE KQYLAIVHGH WPDKLKRVDA PLEKWQGEGE SHRVQVNPQG KEAVTHFAVL
AANKNATLLR AQLETGRTHQ IRVHTAHENH PIVGDEKYGQ REWDKRLFPS TGASARRRPP
LLLHAYRLML THPQTEQPLQ LTAPIPDKWR SLAQQLNLTL PEHDPK
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