| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1756 |
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| Symbol | |
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| ID | 8534914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1887667 |
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| End bp | 1890717 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646384138 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003263626 |
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| Protein GI | 261856343 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000532878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TGCTAATCAA TGCCACCCAG GCCGAAGAGA TTCGGGTGGC GCTCGTCGAT
GGACAGACGC TCTATGATAT CGACATAGAA ACGCCCGGCC ACGAGCAGAA AAAATCCAAC
GTTTACAAAG CGTTAATTAC ACGCATTGAG CCGAGTCTCG AAGCGGTTTT CGTCAACTAC
GGCGCAGACC GCCATGGTTT TTTGCCCTTC AAGGAAATTG CACGCAGCTA TTTTGATTCG
GAGGCCGTCG ATGACAAGGG TCGCCCGATC ATCAAGTCGG CGCTGAAAGA AGGCCAGGAA
ATCATCGTTC AGGTCGAGAA GGAAGAGCGC GGCAATAAAG GTGCCGCCCT CACTACGTTC
GTCAGCCTGG CGGGACGATA CCTTGTTTTA ATGCCCAACA ACCCGCGGGC GGGCGGGGTT
TCCCGTCGCA TCGAGGGCGA TGATCGCGCC GAGATCAAGG CGGCGCTGTC CGAGTTGGTC
GTGCCCGAAG GCATGGGTCT GATCGTCCGC ACGGCAGGTG TCGGACGTGA ACCCGCCGAA
CTGCAATCGG ATCTCGACTA CCTGCAACAG GTATGGGACG CCATTGTCAA AAAATCGGAA
GCCCGCAAGG CCCCGTTCCT GATTTATCAG GAAAGCGACC TGATTATCCG TGCGCTGCGC
GATTACATGC GCAACGACAT CGGCGAGGTG CTGATCGACG AGCCCAATAT GCATCAGCAG
GCGCTGGATT TCGTCAATCT GGTGTCGCCG GATTCCGTGG ACAAGATTCG CCTCTACCAG
GATCGTACCC CGTTATTCAC GCGTTACCAG ATCGAATCCC AGATCGAATC GGCCTACGAG
CGGAATGTGA CCCTGCCTTC CGGCGGCGAG CTGGTATTCG ATGTGGCCGA GGCCCTGACG
GCGGTCGACA TCAATTCCGG CCGCAGCACC AAAGGGCAGG ATATCGAAGA TACGGCCTTC
AACACGAACC TTGAAGCAGC CGATGAGATC GCTCGTCAAC TGCGCCTACG GGACTTGGGC
GGTCTGGTCG TCATCGATTT CATCGACATG GGGCAACCCA AACATCAACG GGAAGTAGAG
AACCGCCTGC GCGATGCACT CAAGATGGAT CGTGCCCGGG TGCAACTGGG ACGAATTTCC
CGTTTCGGCT TGCTCGAAAT GTCGCGTCAG CGGTTGTCCG CCTCTCTGGA AGAATCGGCG
CAGCATGTGT GCCCGCGCTG CATGGGGCAG GGGCATATCC GTTCGGTTGA ATCCTTGGCG
CTTTCGATCA TGCGCTTGAT GATCGATGAG TCCATGAAAG ATCAGACCGG TCGGGTCGTC
GCTCAGGTGC CCGTCGATGT GGGCACCTAC CTGCTCAACG AAAAGCGCCT TCAGCTCCAC
GAGATTGAGC AGAATCATCA GGTTGAGGTG TTGGTGATTC CCAACATCAA TCTGGAAACA
CCACACTTTA AAATCGAACG CGTTCGTCGC TCTGATCTTG CCGAGTCGCC GGCCAATTCA
CGTGCCCTTA TTGAACCGCT CGCCGTGGCC GTACCTGACC TGGAGCGTGC GCCGCGCCGT
CCGGCGGCGC CGGTTGAACC GATTCGCCCC GTGCCGCAGT CTGCGCCTCG GCCCAAGGTT
GTCGCCAGCG TCCCCGATGT GGCTACTGAA CCGGCGGCCA GCACGAGCGC AGCCAATATC
GGTGCGTTGG GATTGCTCAA GCGCGTGATT GGTCAGATTT TCGGTGCCGG TGACAAGCGG
GTTGAGGCGG AAGTGGCCGC TCCCCGTGAT CCGGCTAGGA AGGCATCATC GAATCGACCG
CCGCGTGCGA AGGACGAGAA TCGGGCCACA CCGAATCGAT TACCTCGTGC CGCGACGCAA
ACGAGCGAGT CAGAAGCAAG ACTAGAGGAT AAGCGCCGTG ATGAAGGCAA GGTAGAGGGC
ACGAAACCAG AAGGTTCGAG CAACCGTCGT CGTCGTTCAC GCAGCAGAAA ACCAGCGGAA
GGCCAAAGAG ATGCTCAGGT TAATACCGCC GCTTCGGCGA ATCAGCCTGC TGAAGCACCG
GCTGTCACCA CGGATACTGC AGAGGGCAAG GGCTCAGCGA AAGCACCTGA AAAAACCACG
GCCCGTCAAC GCGAGCCCCG CTCATCCGAG CCGGCCGTTC GTCCGATTGC CGCACACGAG
CAAAGTCTGA TCGACCAGCA ACTCAAGGCG CCGGTGGCAT CACCTTCTGC CTTGCCTCTC
AATGTTGCAG TCAAACGTGA TCCGGCTGCT GCATTGGCAC CAAACGCGGC ATTGGGATTG
CTCGCGGATG ATGTGATCGT TCCCGCTCTT GTGGCTGCGG CCATAACGCC CAAGGCAGAA
GCCCAGATTG CTGCACCTCA GCCCGAAGAT ACAGCGGCAA ACGAAGTGAA TGTGGCGCCT
TCTGCTCCTA TGGTCGAATC GCAGGCCGAA GCACCGACGG ATACCACGAT TGCGGCAGTC
ACCCCAGTCG TTGCAGAACC GGTATCCGCA GCGGAGCCTG TCATTCACAC GAAGGAAGAA
ATGCCGTCAG TGGCCGCAAC CGAGTCGCCG GTTGAAACGT CCACGCTCAT CCCTGAAGCG
ATAGCTGAAC AGATCGTTGC GCAGCCGGTA GAAGCAACGA ACGATTCTCC ATGGTCGCAA
GCCAGTGCCA TACTGGCTGC CAAGCAAGAC GAGGTTGCTG CACCTGCCGC ATCAGAGACC
AAAGTCGCCG ACGAACCGGT CTCTGAGAAA GCGCCGACAG ACGTGCAGCC GAATGCGTCG
GCAGTCGACG AAGTTGAACC TCCGGTCGCT CAGGCCGAGT CGATCCATGA TTCTCCTGCT
ATGGCGTCCG AACATGCGCC TGTGGCGGAG GCGATCATTG AATCTGCGCC CGTCGAATCT
GAGCCTGTGG AAGCGGTTAC CGAAGCCGAG CAGCCGGAGG CGACGACAGC GGACGCTGTC
ACTGAAGCGA CAACTCAGGT TGAAACAGCG CCTCAAGAAG ACGTTCATCC AGAAGCGATT
GCAACGACAG ATTCTGCCGA AGAGACCGTT CGTAAGGAAC CAAATGCATA A
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| Protein sequence | MKRMLINATQ AEEIRVALVD GQTLYDIDIE TPGHEQKKSN VYKALITRIE PSLEAVFVNY
GADRHGFLPF KEIARSYFDS EAVDDKGRPI IKSALKEGQE IIVQVEKEER GNKGAALTTF
VSLAGRYLVL MPNNPRAGGV SRRIEGDDRA EIKAALSELV VPEGMGLIVR TAGVGREPAE
LQSDLDYLQQ VWDAIVKKSE ARKAPFLIYQ ESDLIIRALR DYMRNDIGEV LIDEPNMHQQ
ALDFVNLVSP DSVDKIRLYQ DRTPLFTRYQ IESQIESAYE RNVTLPSGGE LVFDVAEALT
AVDINSGRST KGQDIEDTAF NTNLEAADEI ARQLRLRDLG GLVVIDFIDM GQPKHQREVE
NRLRDALKMD RARVQLGRIS RFGLLEMSRQ RLSASLEESA QHVCPRCMGQ GHIRSVESLA
LSIMRLMIDE SMKDQTGRVV AQVPVDVGTY LLNEKRLQLH EIEQNHQVEV LVIPNINLET
PHFKIERVRR SDLAESPANS RALIEPLAVA VPDLERAPRR PAAPVEPIRP VPQSAPRPKV
VASVPDVATE PAASTSAANI GALGLLKRVI GQIFGAGDKR VEAEVAAPRD PARKASSNRP
PRAKDENRAT PNRLPRAATQ TSESEARLED KRRDEGKVEG TKPEGSSNRR RRSRSRKPAE
GQRDAQVNTA ASANQPAEAP AVTTDTAEGK GSAKAPEKTT ARQREPRSSE PAVRPIAAHE
QSLIDQQLKA PVASPSALPL NVAVKRDPAA ALAPNAALGL LADDVIVPAL VAAAITPKAE
AQIAAPQPED TAANEVNVAP SAPMVESQAE APTDTTIAAV TPVVAEPVSA AEPVIHTKEE
MPSVAATESP VETSTLIPEA IAEQIVAQPV EATNDSPWSQ ASAILAAKQD EVAAPAASET
KVADEPVSEK APTDVQPNAS AVDEVEPPVA QAESIHDSPA MASEHAPVAE AIIESAPVES
EPVEAVTEAE QPEATTADAV TEATTQVETA PQEDVHPEAI ATTDSAEETV RKEPNA
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