| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1604 |
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| Symbol | |
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| ID | 8534762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1746091 |
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| End bp | 1746837 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383993 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003263481 |
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| Protein GI | 261856198 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCC AAGAGCATCG TGTTGCCCTT GTTACAGGAT CGACAACAGG CATCGGAGCC
GCCATCGCTA GGCGTTTGGC ACAAGAAGGG CTGACGGTGG CACTTCATTC AAAGTCCTCT
GTCAGCGCAG GCATTGCGCT TGCCAATGAA CTCGGTTGCG CCAGTTACAC GCAAGCCAAC
CTGGCTGAGA AAGAAGATAT TTGTCGCTTA ATCGACACGG TGGTTGAAAA GCATGGACGG
CTCGATGTGT TGATTAACAA TGCCGGAATC ACTGAAGTCA TTCCACACGC TGCGCTCAAG
GAGGCTACGG CTGATATTTG GCGAAAACTG TACGAAGTTA ATGTCGTCGC TCCATGGCTG
CTTATTGGAG AAGCGGAAGC TGCATTACGA CAAAGCGCCA CAGCAGGGCG ATCCAGTTGC
ATTGTGAATA TTAGCTCTCA TGCGGGCGTG AGACCCAAAG GGGCATCCAT TCCCTATGCG
GTTAGCAAGG CCGCCTTGAA CCACATGACA AAGCTGCTTG CAGTTTCCTT GGGGCCTGTC
GTTCGAGTGA ATGCAATAGC CCCTGGCCTT GTCGATACTT CCATGACGGA AGCATGGGAA
GAAGCTCAGA AACTTTGGCG TAATCGCTCT CCCATGCGCC GCCCCGCGAA ACCAGAAGAC
ATAGCCGACC TTGTCGCCAT GATCGTACGC TCAGACTATC TAACAGGTGA GATCATCGTT
GCAGATGGAG GCCTTAATCT CATATGA
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| Protein sequence | MTTQEHRVAL VTGSTTGIGA AIARRLAQEG LTVALHSKSS VSAGIALANE LGCASYTQAN
LAEKEDICRL IDTVVEKHGR LDVLINNAGI TEVIPHAALK EATADIWRKL YEVNVVAPWL
LIGEAEAALR QSATAGRSSC IVNISSHAGV RPKGASIPYA VSKAALNHMT KLLAVSLGPV
VRVNAIAPGL VDTSMTEAWE EAQKLWRNRS PMRRPAKPED IADLVAMIVR SDYLTGEIIV
ADGGLNLI
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