| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1598 |
|---|
| Symbol | |
|---|
| ID | 8534756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 1740873 |
|---|
| End bp | 1742108 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646383987 |
|---|
| Product | Formamidase |
|---|
| Protein accession | YP_003263475 |
|---|
| Protein GI | 261856192 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2421] Predicted acetamidase/formamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.52036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA AACTGATAGA AATTGATTTT TCGCAACCAC CAGAAGCGCA CGATTGCATT
CATAATCGTT GGCACCCGGA CATCCCCATG TACGCATGGG TAAAGCCGGG TGACGACTTC
GTTCTTGAGT GCATGGACTG GACCGGCGGC CAGATCAACA ACAATAACTC TGCCGACGAT
GTCCGTGACG TGGATTTGAC TAAGGTCCAC TATTTAAGTG GACCCATCGG TGTGGATGGA
GCCGAACCGG GGGACTTGTT GGTCGTTGAT ATCCTCGACA TCGGCACACT GGAACAATTC
CAGTGGGGGT TCAATGGCAT ATTCGCCAGA GAAAACGGTG GTGGCTTCCT GACCGAACAT
TACCCGGATG CGCGAAAATC AATCTGGGAT TTCAACGGCA TTTATACATC CTCTCGCCAC
GTACCCGGTG TGAACTTCGC GGGAATCATG CATCCGGGTC TGATCGGTTG CCTTCCCTCC
AGAGAATTGC TGAACGAATG GAACAAGCGA GAAGGTGCCC TGATCGCGAC CGATCCTGAA
CGTGTTCCTC CGCTCGCAGC ACCGCCCTGT GCTGGCACCG CTCACATGGG CCAACTCAAA
GGGGATAAGG CGAAAGCAGC CGCGCTCGAA GGTGCGCGCA CGGTTCCGCC CCGTGAACAC
GGCGGCAACT GCGACATCAA GGATCTCACC AAAGGCTCTC GTGTCTTTTT CCCTGTTTAT
GTGAAGGGTG CCGGTCTTTC GATGGGCGAT CTACACTTCT CGCAGGGCGA TGGAGAAATC
ACCTTTTGTG GTGCCATCGA GATGGCCGGC TGGATTCATA TCCGAGTCAG CATCATCAAG
GACGGTGTTG CCAAATACGC TGTCAAGAAC CCAATTTTCA AGCCGAGCCC ACTACAGCCA
AACTACCAGA ATCACCTGAT TTTCGAAGGG ATTTCCGTAG ATGAATCAGG CAAGCAGCAT
TACCTGGATG CGCATGTTTC ATACCGCCAG GCCTGCCTGA ACGCGATCGA ATACCTCAAG
AAATTCGGCT ACACCGGAGC CCAGGCCTAT TCGATCCTCG GTACGGCTCC TGTCCAAGGT
CACATCAGCG GCATCGTCGA CATTCCGAAC GTGTGCGCAA CACTCTTCCT GCCAACAGAA
ATCTTCAATT TCAACATTGA TCCTTGCGCC GAAGGCCCGA CCAAGTACAT CAAGGATAAC
GACGATGTGC CGGTTTCCTA CTGGGCTGAT AAATAA
|
|---|
| Protein sequence | MAKKLIEIDF SQPPEAHDCI HNRWHPDIPM YAWVKPGDDF VLECMDWTGG QINNNNSADD
VRDVDLTKVH YLSGPIGVDG AEPGDLLVVD ILDIGTLEQF QWGFNGIFAR ENGGGFLTEH
YPDARKSIWD FNGIYTSSRH VPGVNFAGIM HPGLIGCLPS RELLNEWNKR EGALIATDPE
RVPPLAAPPC AGTAHMGQLK GDKAKAAALE GARTVPPREH GGNCDIKDLT KGSRVFFPVY
VKGAGLSMGD LHFSQGDGEI TFCGAIEMAG WIHIRVSIIK DGVAKYAVKN PIFKPSPLQP
NYQNHLIFEG ISVDESGKQH YLDAHVSYRQ ACLNAIEYLK KFGYTGAQAY SILGTAPVQG
HISGIVDIPN VCATLFLPTE IFNFNIDPCA EGPTKYIKDN DDVPVSYWAD K
|
|---|
| |