| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1468 |
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| Symbol | |
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| ID | 8534625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1584295 |
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| End bp | 1585770 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383858 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_003263347 |
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| Protein GI | 261856064 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0601103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG AGATTCTTTT TGTAGCCGAT GCGGTTTCAA ACGAAAAAGG GGTTGACCGC
GAAGTCATTT TCGAGGCGAT CGAAGCCGCG CTTGCCCAAG CTGCCCGCAA ACGTCATGGC
GGCGACATCG ATACACGAGT GCAAATCGAC CATGAAACGG GTGATTACCG CACATTCCGT
CGCTGGCAGG TTGTCGAGGG CGATTCTTCT GAGTTCCCAG AGCGTGAAAT GATTCTCGAA
GCGGCGCAGA TGGACGATCC TGATATCAAA GTGGGTGAGT TCGTCGAGGA AGAAATTGAG
TCCGTCGAAT TCGGCCGCAT CGCGGCTCAA GCCGCCAAGC AAGTCATCGT GCAGAAAGTG
CGCGAGGCAG AGCGGCGCCA GATCGTCGAC GCCTACATCG ATCGCAAGGG CAGCCTGATC
ATGGGGCTGA TCAAGCGAAT TGATCGCGGG AATGTGATCT TGGATTTGGG CGGTAACGTC
GAAGCGCTGA TCCCACGGGA TGAAATGATC GGCCGTGAAG CGGTGCGTCC AGGCGACCGT
CTGCGTGGCT ATTTGGCGGA TGTTCGTCAT GAGCCGCGTG GCCCGCAGCT GTTCGTCAGC
CGCACTGCAC CCCAGTTCCT GATCGAACTG TTCAAGCTGG AAGTGCCGGA AATCGAACAG
GGCTTGATTG AAATCAAGGG TGCCGCGCGT GACCCCGGCT TGCGTGCCAA AATCGCCGTT
GAATCCCGTG ATAGCCGGAT CGATCCGGTC GGTACCTGTG TCGGTATGCG CGGCTCGCGT
GTTCAGTCGG TTACCAATGA ACTCAACGGC GAACGCGTGG ACATCATCAT CTGGGATAGC
AACCCGGCTC AGTTTGTCAT CAATGCCATG TCACCGGCAG AAGTCGTGTC GATTGTGGTC
GATGAAGATC GACACAGCAT GGACGTTGCC GTTACAGAAG AAAAACTCTC CCAGGCGATT
GGTCGCGGTG GACAGAACGT GCGACTGGCT AGCCAGTTGA CCGGATGGCA CCTGAATGTG
ATGGGCGAGG AAGAAGCGGT TGCGAAAGTA GAAACCGAAA CCCGTCGCGC TACTGAAGCA
TTCATGCGTG ATCTTGACGT CGATGAAGAT GTGGCCGCCG TGCTGGTCGA GGCAGGTTTT
TCCTCTCTGG AAGAAATTGC TTACGTGCCG ACCGCCGAAC TGCTGGATGT TGAAGGTTTC
GATGAGGGTA TCGTTGAAGA ACTTCGCAAC CGCGCTCGCG ACGCACTCTT GGTTCAAGCT
ATTTCAGACG ACGCTGGTGA ATCGACGGAA GAACTCGATA TCGCCCAGCT GGAAGGCATG
ACACCTGAAC TGCTCACCAT ATTGAATGCG GCTGGTGTGC ACACATCAGA TGATCTGGCA
GAGCTGTCGG TTGACGAGAT GACCGCCTTT GACGGCGTCG ATGAGGCATT GGCACAACAG
TTGATCATGG CGGCGCGTGC GCCGTGGTTC GCCTAA
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| Protein sequence | MSKEILFVAD AVSNEKGVDR EVIFEAIEAA LAQAARKRHG GDIDTRVQID HETGDYRTFR
RWQVVEGDSS EFPEREMILE AAQMDDPDIK VGEFVEEEIE SVEFGRIAAQ AAKQVIVQKV
REAERRQIVD AYIDRKGSLI MGLIKRIDRG NVILDLGGNV EALIPRDEMI GREAVRPGDR
LRGYLADVRH EPRGPQLFVS RTAPQFLIEL FKLEVPEIEQ GLIEIKGAAR DPGLRAKIAV
ESRDSRIDPV GTCVGMRGSR VQSVTNELNG ERVDIIIWDS NPAQFVINAM SPAEVVSIVV
DEDRHSMDVA VTEEKLSQAI GRGGQNVRLA SQLTGWHLNV MGEEEAVAKV ETETRRATEA
FMRDLDVDED VAAVLVEAGF SSLEEIAYVP TAELLDVEGF DEGIVEELRN RARDALLVQA
ISDDAGESTE ELDIAQLEGM TPELLTILNA AGVHTSDDLA ELSVDEMTAF DGVDEALAQQ
LIMAARAPWF A
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