| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1467 |
|---|
| Symbol | |
|---|
| ID | 8534624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1581468 |
|---|
| End bp | 1584161 |
|---|
| Gene Length | 2694 bp |
|---|
| Protein Length | 897 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646383857 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_003263346 |
|---|
| Protein GI | 261856063 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.382295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGG TCACGGTTAA AGATTTAGCG AAAACAGTTG GTTCCACCCC TGAGCGCCTG
CTTGTGCAGT TGGCCGAGGC TGGTGTAAAA GCCAGTTCGG CGGACTCCCT GATTGGCGAT
GGCGATAAAA TGAAGCTCTT GGCTTATTTG CGCCAACACT CTGCCAAGGA TGCCGGTGAA
GCCAAACCTA ATCGCATCAC CCTGCAACGC AAGAAGCAGG AAGAAATCAA GGTCGGCGGA
GGAGCCGCCC GCGGCAAAAC AGTTGCAGTC GAGTATCGCA GCCGCAAAAC CTATGTTGCC
CGTGAGGCAG CCCCTGTTCA GGCGGTTGAA GAAAAACCAC TGGTGGTCGA GCCCGTTGTA
GCGAAGGCGC CAGAGCCTGC GGTTGTCCCT GCCGTTGAAA ATACGTCCGT AGTAATCAAG
GCAGAAGCGT CAGTAACCCA GGAATCAGGG TCTGATGTGG TTCGAGATGA GCAAGCTGTT
GCTGAAAGCC CAGCCGTTGA GACGGCATCG GTGAAAAATG AAGAAACAAC TTCAACTGCC
GCAGCGCCTT CGGCCGCTGA GCCGTTCGAT ACCATTCTCG ACGAATCGGC TGATGAGAAA
TCGACCTCCG ATGTTTTACC TCAAGCTATT GATGAGTTGA CGGGGCGCCC CAAATCCCGG
TTGCGCATTA TCGCCATGCC TACGGCCGAA TCCGAAGGGG CGACAGCCAA TGCGCGTCCG
GCACCGGGGA AATCCGCCGC CGAAGACGAG TCAGCACGTA AGAAAGGCTC CAAACATAGT
GGCAAAGGGC GTCATGAACG CGAAGTCAAA ACCGGTCGCT CAGAGCTCCA TCTGGGTGCG
GGCGCAGAAG AGCGTCGCGC CAAGCGTGGA CGCAAATCTT CTGCCCGATC CGGTGTTGCC
AGCAAGCAGA CGAGTAACTT TGAAAAGCCA GTCGCGCCTG TCATTCGTGA TGTAACGATT
CCGGAAACAA TTTCCGTATC CGATTTGGCG CAGAAAATGT CGATCAAAGG CGTGGACGTT
GTTAAAACAC TCTTCAGCAT GGGCGTGATG GCGACGATCA ATCAGATGAT CGATCAAGAT
ACGGCCGTTT TGGTTGTTGA AGAAATGGGC CACACGCCGA TTCCTGTCTC CGATTCCACG
CTGGAAGCCG AGCTGGATCA AGCGATCGAA CAAGGCGTGG CCCTGCCACG ACCACCGGTT
GTTACCGTTA TGGGCCACGT CGATCATGGT AAAACCTCAT TGCTGGATTA CATCCGTCGG
GCGAAAGTCA CGGCCGGTGA GGCCGGTGGT ATTACCCAGC ATGTGGGTGC CTACCATGTT
GAAACCAATC GCGGCGTGAT TACGTTCCTC GATACCCCCG GCCACGAAGC CTTTACCGCC
ATGCGCGCCC GTGGTGCCAG TGTTACCGAT CTGGTGATTC TGGTCGTCGC TGCCGATGAT
GGCGTGATGC CGCAAACCAA GGAAGCCGTT CAGCACGCAC GCGCTGCTGG CGTGCCGATT
GTGGTTGCGA TCAACAAGAT CGATAAACCC AATGTCGACC TTGAGCGGGT TCGTAGTGAA
CTGTCCCAGC TGGAAGTTAT TTCGGAAGAG TGGGGCGGAG ACACACAATT CGTTCCGGTA
TCGGCTAAAA CCGGCGTGGG GATCGACCAG TTGCTGGATG CGGTTCTGGT GCAATCGGAA
GTGCTGGAAC TCAAAGCCCC GGTAGAAGGC CATGCCAAGG GTACCGTGGT TGAATCTTCA
CTTGAAAAAG GACGCGGTCC CGTTGCGACG GTCCTGGTTC GTAGTGGAAC GCTCAACAAG
GGCGATGTCG TGCTCGTTGG TTCGGAATAT GGCCGTGTTC GCGCCATGCT CGACGAAAAC
GGCGCGCCCA TCGAGTCCGC TGGCCCCTCG ATTCCAGTGG TCATCATCGG TCTATCGGGT
ACACCGCAGG CGGGTGATGA TCTCGTGGTG GTCGAAGATG AACGCAAGGC GCGTGAAATT
GCCCTGTTCC GTGCAGGCAA ATACCGCGAT AGCCGTTTGG CGACTCAGCA GTCTACGAAG
CTTGAAAATC TGTTCGATCA GATGAAGGAA GGCGAGGTGG CTACCCTGAA CGTTCTGGTT
AAGGCAGACG TACAGGGTTC TGCGGAAGCG ATTCGCGACA GCTTGAACAA GTTGTCTACC
GATGAAGTTA AGGTCAATGT GTTGATGAGC AGTGTTGGCG GTATCACCGA GTCGGATGTA
AATCTGGCGA CGACTTCCAA TGCGATTCTG ATCGGCTTCA ACGTCCGCGC CGAGGCATCT
GCACGCAAGC TTGCACAGGC TCAGAGCGTC GAAATTCGTT ACTACAGCAT CATTTACGAA
ATGATCGATG ATGTCCGCCA CGCCATGAGC GGTTTGCTGG GTACGGAAAC GCAGGAGAAG
ATCGTCGGCC TCGCCGAAGT GCGCGACGTC TTCCGTTCGC CGAAGTTTGG CGCCATCGCG
GGTTGTATGG TTACCGAAGG GGTTATCCGT CGCGGCAACC CGATTCGCGT GCTGCGAGAC
CACGTGGTGA TTTACGAGGG TGAGCTCGAG TCGCTTCGTC GCTTCAAAGA CGACGCACAG
GAAGTGCGTG CAGGCTTTGA TTGCGGTATC GGTGTCAAGA ACTACAACGA TGTTCGCGCC
GGCGACATGA TCGAAGTGTT TGAGCGTGTC GAAGTTCAGC GAACCTTGTC ATAA
|
|---|
| Protein sequence | MSEVTVKDLA KTVGSTPERL LVQLAEAGVK ASSADSLIGD GDKMKLLAYL RQHSAKDAGE
AKPNRITLQR KKQEEIKVGG GAARGKTVAV EYRSRKTYVA REAAPVQAVE EKPLVVEPVV
AKAPEPAVVP AVENTSVVIK AEASVTQESG SDVVRDEQAV AESPAVETAS VKNEETTSTA
AAPSAAEPFD TILDESADEK STSDVLPQAI DELTGRPKSR LRIIAMPTAE SEGATANARP
APGKSAAEDE SARKKGSKHS GKGRHEREVK TGRSELHLGA GAEERRAKRG RKSSARSGVA
SKQTSNFEKP VAPVIRDVTI PETISVSDLA QKMSIKGVDV VKTLFSMGVM ATINQMIDQD
TAVLVVEEMG HTPIPVSDST LEAELDQAIE QGVALPRPPV VTVMGHVDHG KTSLLDYIRR
AKVTAGEAGG ITQHVGAYHV ETNRGVITFL DTPGHEAFTA MRARGASVTD LVILVVAADD
GVMPQTKEAV QHARAAGVPI VVAINKIDKP NVDLERVRSE LSQLEVISEE WGGDTQFVPV
SAKTGVGIDQ LLDAVLVQSE VLELKAPVEG HAKGTVVESS LEKGRGPVAT VLVRSGTLNK
GDVVLVGSEY GRVRAMLDEN GAPIESAGPS IPVVIIGLSG TPQAGDDLVV VEDERKAREI
ALFRAGKYRD SRLATQQSTK LENLFDQMKE GEVATLNVLV KADVQGSAEA IRDSLNKLST
DEVKVNVLMS SVGGITESDV NLATTSNAIL IGFNVRAEAS ARKLAQAQSV EIRYYSIIYE
MIDDVRHAMS GLLGTETQEK IVGLAEVRDV FRSPKFGAIA GCMVTEGVIR RGNPIRVLRD
HVVIYEGELE SLRRFKDDAQ EVRAGFDCGI GVKNYNDVRA GDMIEVFERV EVQRTLS
|
|---|
| |