| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1462 |
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| Symbol | |
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| ID | 8534619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1575868 |
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| End bp | 1577085 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646383852 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_003263341 |
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| Protein GI | 261856058 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCCA CGCCTATGCT GATTCAACAT ATACGTTTAG CCCGCCAGCC GATTGTAGAC
CGGGAATTGA ATACCATCGG GTACGAACTG CTCTACCGTG CACAGGACGC AGACCAAACT
GCTCGTATCA GTAATTCCAA CCAGGCCACC GCTTCGGTGG TGATCAACGC ATTAACGGAA
ATTGGTTTGG ATGTGCTGGT GGGTACCCAG CAGGCATTCA TCAATGTACC GCTTAAGTTG
CTGTTCAACG ATGTCCTCAA AGGTATCGTG GCGCGACAAA TGGTGCTGGA AATCTTGGAA
ACGGTCGAGT GCAATGAATC GACCGCCGAA GCGATGGCCA CGCTAAAACA ACTCGGTTTT
CGTATAGCGC TGGATGATTT CCCGGTGGGT AACATCGGCC AGCCTTGTGT CAAGAATGCG
CACTACGTCA AGCTGGATGT GCTCTCTGAC GGCGTTGATA AAATTGCACA GGTGGTCAAG
CATGCGCACG ATGCCGGTTT GAAGGTAATC GCCGAAAAGG TTGAAGAATG GAGCGATTAC
GAGACACTGA AAGCCGCCGG TGTTGATTAT TTTCAAGGGC ATTTCTTTTC ACGGCCAGAA
ATGATCGTTC GTCAGACCAT CCGGGCAAAC AAGGCCCATC TGCTGAGCAT GTTGATTCTG
CTTCAAGATG AGAATGTCAC TCTGGACGCG ATCTCTGAGA AAATAAATAC CGATTTGGGG
CTGACCTATC GCTTGCTGCG GTTGGTCAAC TCGGCGGCCA TCGGCATGCG CCGCAAGGTT
GAATCTGTGC CTGACGCTGT TCGCATGTTG GGCATCAATA CCATTCGAAG CATGGTTTAC
CTTTCGGCGT TGACGGGCGT GGCAGGGAAA CCGTCGGCTT TGATTACGAC CGCAATGGTT
CGGGCCCGAT TTGCAGAATT ACTCAGCAAG AAAACTGGAT TGGGTAACCC GTCGTCTGCG
TTCATGGTGG GATTGTTCTC GACTTTAGAT GCGTTCTACG ATCAGCCTAT CGAGCAGATA
GTTGGTGAAT TGCCGTTGTC TGACAGTATT GCAGAGGCTC TGGTGAGTCG AAAAGGTGTG
CTCGGCGAGA TACTCGAATA TCTCGTATTC TACGAGCGTG GCATCTGGCT TGATGGGGAT
GAAATCACTA ATAAGCTCAA TGCCTGCGCG CCAGAACTTT ATGTCGAAGC CGTCAACTGG
GCTGAAAAAA TCAGCTAA
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| Protein sequence | MTSTPMLIQH IRLARQPIVD RELNTIGYEL LYRAQDADQT ARISNSNQAT ASVVINALTE
IGLDVLVGTQ QAFINVPLKL LFNDVLKGIV ARQMVLEILE TVECNESTAE AMATLKQLGF
RIALDDFPVG NIGQPCVKNA HYVKLDVLSD GVDKIAQVVK HAHDAGLKVI AEKVEEWSDY
ETLKAAGVDY FQGHFFSRPE MIVRQTIRAN KAHLLSMLIL LQDENVTLDA ISEKINTDLG
LTYRLLRLVN SAAIGMRRKV ESVPDAVRML GINTIRSMVY LSALTGVAGK PSALITTAMV
RARFAELLSK KTGLGNPSSA FMVGLFSTLD AFYDQPIEQI VGELPLSDSI AEALVSRKGV
LGEILEYLVF YERGIWLDGD EITNKLNACA PELYVEAVNW AEKIS
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