Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1447 |
Symbol | |
ID | 8534604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1562895 |
End bp | 1564304 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383837 |
Product | membrane-associated zinc metalloprotease |
Protein accession | YP_003263326 |
Protein GI | 261856043 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.843225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTC TAATGAGTTT GTTGGGGTTC CTGATCACCA TCGCGGTGTT GGTCGCATTC CATGAATACG GCCACTTCTG GGTTGCCCGA AAGCTTGGGG TCAAGGTTCT GACGTACTCA CTCGGCTTTG GCCCTACGTT ATGGTCCACC CGTAAGGGGC CGGATGCGAT TGAATACCGT ATTGCCGCTT TTCCTTTGGG CGGTTACGTA AAAATGCTGG ATGAACGCGA AGCGCCCGTC GACCCATCCG AGCAGCATCG GGCGTTCAAC AGCCAGCCCG TCTGGAAGCG TTTTCTGATT GTTCTTGCCG GACCGGTTGC GAATATTCTG CTTGCACTCG TACTCTGGAT GATGATGTTC ATGGTCGGAG TTCAGGGTGT GCTGCCGAAG GTTGGCGTGG TGCCCGCCGA TTCCGTTCTG GCTCGAAGCG GTCTTCAGGA TGGTGATGTG ATTACGCAAG TCGGAGGACA AGCCATTCAT AGCCTTTCCG ATCTGCGACT TGCTGTGTTG GAAGGGGGCG TGGCCGGGGC CAAAGTGCCC ATCGAATTTG AACATCAAGG TGCTGTCAAC ACGGGCACTC TCGATTTGAC CAAGCTCAAA CCACTTCAGG GGAATCATCA GGGACCGGCG AGGGATGTGT TGAGAGAGAT TGGCTATCGA TTGTGGTCGC CAAAGGGTGA TGCCCTCATC CATAAGGTGA TGGCTGCCAG CCCCGCCGAG CAAGCCGGCT TGAAGAAAGG CGACATCATT GAGGAGATCA ATGGTTCGAC GTATCGGGAT CCCTGGGCTC TGATTACCCG CATCGAGCAT TCTCCTGGCA AGCCCGTCAC GCTGACCGTG CTTCGAGATG GGCGTACAGA ACAGATCACG GTGACGCCCA AGACCGAAAC ATCCACCAAT GTCGATGGCA AAACAACCTC CGTTGGGCGG ATCGGTGCCC AGTTGGGCCT GGTGCCCGAT GCCGTGGCGC GCGCGAAGGC TGATGGGATA CAGATGCTGG TTCTGGAGCG ATACAATCCG GTTGAAGCGT TATCTATGGC CGCATCGCGG AGTTGGGCCA TGACCACGCT GACTTTTAAT GTCTTCGGTG GCTTGCTTAC CGGTCAGGCG AGCTTATCCA ATCTCTCAGG TCCGGTGGCG ATTGCCGAGT ACGCCGGGCA GAGTCTGGTT ATCGGCTTTT CAACTTTCCT TGGGTTCATG GCACTGGTCA GCCTGTCGCT CGCCATCATG AATTTGCTGC CCATCCCCTT GCTGGACGGC GGCCATTTGG TGCTTTATGT GGTTGAAGCT CTTCGTGGGA AGCCCGCGGA GGCCGCGCTT GAAGCCGTTG CAACCAAGAT AGGTCTGGCC TTTCTGGTGA GTTTGATGGC GCTGGCTTTC TATAATGACA TCTCACGGTT GCTGCACTAG
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Protein sequence | MNILMSLLGF LITIAVLVAF HEYGHFWVAR KLGVKVLTYS LGFGPTLWST RKGPDAIEYR IAAFPLGGYV KMLDEREAPV DPSEQHRAFN SQPVWKRFLI VLAGPVANIL LALVLWMMMF MVGVQGVLPK VGVVPADSVL ARSGLQDGDV ITQVGGQAIH SLSDLRLAVL EGGVAGAKVP IEFEHQGAVN TGTLDLTKLK PLQGNHQGPA RDVLREIGYR LWSPKGDALI HKVMAASPAE QAGLKKGDII EEINGSTYRD PWALITRIEH SPGKPVTLTV LRDGRTEQIT VTPKTETSTN VDGKTTSVGR IGAQLGLVPD AVARAKADGI QMLVLERYNP VEALSMAASR SWAMTTLTFN VFGGLLTGQA SLSNLSGPVA IAEYAGQSLV IGFSTFLGFM ALVSLSLAIM NLLPIPLLDG GHLVLYVVEA LRGKPAEAAL EAVATKIGLA FLVSLMALAF YNDISRLLH
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