| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1390 |
|---|
| Symbol | |
|---|
| ID | 8534546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1496002 |
|---|
| End bp | 1496802 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646383781 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_003263271 |
|---|
| Protein GI | 261855988 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATTTTA CATTGATACT GGTGTTGGGC ACCCTGATTT CGGGCTTGAT CTGGCTGACT
GATAGTCTGC TTTTCAAAAA GGCGCGGGTA CGCCGTGCGG CTACGGGTGT GGTTGCCGAT
GGTTCGCCGG TTGTACTTCA TGAACCGTTG TTGGTCGATT ACGCGCGATC TTTTTTCCCT
ATTCTCCTTG TGGTTTTGGT TGTGCGTTCG TTCATTGTCG AACCATTCCG TATTCCATCA
GGTTCGCTGA TGCCCACTTT GCTGGTAGGT GATTTTATTC TGGTCAATAA ATTCAGCTAC
GGCCTGCGTT TACCTGTGCT GGATACTAAA ATCCTGCCCA CATGGGAACC GAAGCGGGGT
GATATTGCAG TATTTCGTTA TCCCAATGAT CCGAAAATCG ACTACATCAA ACGGGTAATC
GGCGTTCCGG GTGATCATAT TCGTGTCGAG GGCAATAAGC TCTGGGTGAA CGGCACGCCC
ATTACCGAAA CCTATGTTGG CGTTTATCCG GGTGATGATG GCATGCGCAT GGCAGGAGCC
ACGGTTTATC GGGAAAACCT GCTTGGCGTG AAGCATGACG TTTTGTTCGA AAAGGATGGA
TACGAAAAGA ACGGTGAGTG GGTTGTGCCG CCTCACGAAT ATTTTATGAT GGGCGATAAT
CGTGACAACA GTAATGACAG TCGTTACTGG GGTTTTGTGC CTGAAGCCAA CTTGGTGGGT
AAAGCCTTCA TGATTTGGTT GCATTGGGAC TGGAAAGACG GCAAATTTGA CGCCAGCCGT
ATCGGCAAGG GTATTCATTG A
|
|---|
| Protein sequence | MDFTLILVLG TLISGLIWLT DSLLFKKARV RRAATGVVAD GSPVVLHEPL LVDYARSFFP
ILLVVLVVRS FIVEPFRIPS GSLMPTLLVG DFILVNKFSY GLRLPVLDTK ILPTWEPKRG
DIAVFRYPND PKIDYIKRVI GVPGDHIRVE GNKLWVNGTP ITETYVGVYP GDDGMRMAGA
TVYRENLLGV KHDVLFEKDG YEKNGEWVVP PHEYFMMGDN RDNSNDSRYW GFVPEANLVG
KAFMIWLHWD WKDGKFDASR IGKGIH
|
|---|
| |