Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1386 |
Symbol | |
ID | 8534542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1493183 |
End bp | 1493908 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646383777 |
Product | DNA repair protein RecO |
Protein accession | YP_003263267 |
Protein GI | 261855984 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.810395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGTG CTTATGTGCT GCATACGCGA CCCTGGCGGG ATACCAGCCT GCTGGTCGAG TGGTTCACTG AAGACTTCGG TCGCCTCACC ACGTACCAAC GTGGCGCGCG AAACCGGGGC AAAAAATCTC CGCTCAGACC GATGGCCTTT CAATGCCTGC ACATGATGCT GGTCGGTCGT GGTGACATGA AAACTGCCAC GCAGATCGAG TCGGCGGGGC GGGCGCATCT TCTGCAAGGT CAGTCGCTTG CCGTCGGGTT TTATTTGAAC GAATTGCTGA TGCGCGCGTT ACATCGGCAA GAGCCTGCGC CGGTATTGTT TGATATTTAT GCACGGCATC TGGCCGAGTT GGCTGGCCCG TCTGTTGATT TCGGTACGGT TGTGCGTGGT TTTGAGCGTG ATTTGCTGGC CGAGTTGGGT GTGGGGATCG ATTGGCAGTC GACCGCTGAT ACTCAAGAGC CGATTGATCA GCAGGCACAG TATTGGTTGG CGCCCGAAGA GGGGATTTTG CAACACCGGG GGCGAGGGTA TCCTGTCGCC GGCAATATAT TGAAGGCCAT TGCGGACAAT CAAACACTTG CCGATGCAGG GGATCGTCGT CAGGCTCGTA ACCTGCTTCA GAGCCTGTTG GCTCCTCATG TTGGTTCGGC CCCGTTTAAC AGCAGGGCTT TGTGGCGGAC GCAGCCCCAA TCTGGCCAGA GCGAACAAAT CCTGAGCACA GAATAA
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Protein sequence | MTRAYVLHTR PWRDTSLLVE WFTEDFGRLT TYQRGARNRG KKSPLRPMAF QCLHMMLVGR GDMKTATQIE SAGRAHLLQG QSLAVGFYLN ELLMRALHRQ EPAPVLFDIY ARHLAELAGP SVDFGTVVRG FERDLLAELG VGIDWQSTAD TQEPIDQQAQ YWLAPEEGIL QHRGRGYPVA GNILKAIADN QTLADAGDRR QARNLLQSLL APHVGSAPFN SRALWRTQPQ SGQSEQILST E
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