Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1385 |
Symbol | |
ID | 8534541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1492351 |
End bp | 1493103 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383776 |
Product | pyridoxal phosphate biosynthetic protein PdxJ |
Protein accession | YP_003263266 |
Protein GI | 261855983 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.899114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAACC GATTGACTGC ACAGCTTCCC CTGTTGGGTC TGAACATCGA CCATGTTGCG ACCTTGCGGC AGGCGCGCGG AACCACTTAC CCCGACCCAG TTCATGCCGC GTTGCTCGCC GAGCAGTCAG GGGCAGATAG CATCACGTTG CACTTGCGCG AAGATCGTCG ACATATCCAG GATCGCGATG TGCTCCGTTT GCGTGATATG TTGCAAACGC GCATGAACTT GGAGATGGCC GTCACCGAAG AGATGATCGA GTTTGCGTGT CTGGTCAAAC CTCATGATTG CTGTCTGGTG CCGGAAAAAC GCGAAGAGCT GACGACAGAA GGCGGGCTGG ATGTGGCCGG TCAGATTGAA CGCATCTATT CTGCCTGTGA CCGATTGAGA GCAGCCGGAA TCCGGGTGTC GTTATTCATT GATGCCGATC CACGGCAGAT CGATGCGGCC GTGGCCTGTG AGGCACCCGT CATCGAACTG CATACGGGGC ATTATGCGGA CACGATGGAT GATGCGGGTC AGAAGCAGAT TTTGAACGAC ATCATCCGTT CGGCACGAGA TGCGACAGAC GTTGGTTTGC AAGTTAATGC GGGCCACGGT CTGCATTACC ACAACGTGCA GGCCATTGCG GCCATTCCTC AGATAGAGGA ATTGAACATC GGGCACGCCA TCATCGCCCG CTCGATCTTT ACGGGTCTGC CACAAGCGGT CGCGGACATG AAAAAACTGA TGCGTGAAGC CCGGATGGGC TGA
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Protein sequence | MTNRLTAQLP LLGLNIDHVA TLRQARGTTY PDPVHAALLA EQSGADSITL HLREDRRHIQ DRDVLRLRDM LQTRMNLEMA VTEEMIEFAC LVKPHDCCLV PEKREELTTE GGLDVAGQIE RIYSACDRLR AAGIRVSLFI DADPRQIDAA VACEAPVIEL HTGHYADTMD DAGQKQILND IIRSARDATD VGLQVNAGHG LHYHNVQAIA AIPQIEELNI GHAIIARSIF TGLPQAVADM KKLMREARMG
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