| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1363 |
|---|
| Symbol | |
|---|
| ID | 8534519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1473952 |
|---|
| End bp | 1476351 |
|---|
| Gene Length | 2400 bp |
|---|
| Protein Length | 799 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646383754 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_003263244 |
|---|
| Protein GI | 261855961 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT TCAAATACAT CCGGTTCTTT GACGAATTGG GGATCGACGA TGTGCCGCTG
GTCGGTGGCA AGAATGCGTC TCTGGGCGAG ATGTACCGCA AGCTATCACC CGCCGGTGTA
CGCATCCCCA ATGGTTTTGC CATTACTGCC GAGGCCTACC ACTACATGCT GGATTCGGCC
AATGCCTGGC CTGCGCTGCA CGAGGCGCTT GATACGCTTG ACCCCGAGGA TGTGAGTGAT
TTGGCGCGGC GTGGCAAGCG AGCGCGGGAA ATTGTCTACG GTGCGGGTTT GCCGGATGAC
TTGGCAAAAG AAATCATCGC AGCCTATCGC AAACTGCAGG AAGAATATGG CGAAGATGTT
GGGCTTGCGG TGCGCAGTTC GGCCACCGCG GAGGATCTTC CAACGGCGAG CTTTGCCGGC
CAGCAGGATA CATTTCTTAA TGTGCGAGGC GATCAAAGCC TGTTGGACGC CTGTCGGCGG
GATTTTGCCA GTCTGTTCAC GGATCGTGCG ATTCATTATC GAGTCGATCA GGGCTTCGAT
CATTTCAAGA TCGGCCTTTC CATCGGTGTC ATGAAAATGG TGCGTTCGGA TCTTTCGGCA
TCGGGCGTGA TGTTCTCGCT CGATACCGAA TCGGGCTTCC GCGATGCCGT ATTCATTACC
GGCAGTTATG GTCTTGGCGA GAATATCGTG CAGGGTGCGG TCGACCCCGA CGAGTTCTAC
GTTCATAAGC CAACATTCGC TGCGGGTCAT CGGGCGGTAT TGCGACGCAA TATGGGCGGC
AAGGCCATCA TGATGGTCTA CATGGAAGGC GATACACGGA ACACAACGCG TAATATTCCC
ACACCGACCG AAGATCGCGA ACGGTTCTGT ATCGGTGATG CCGACGTGCT GGAACTGGCC
GAATACGCCA TAGCAATCGA GGCGCATTAC GGCCACCCCA TGGACATGGA GTGGGCAAAG
GATGGCCTGG ACGGGAAGAT GTACATCGTG CAGGCACGTC CGGAGACGGT GGCATCCCAA
CGTCGGGTCA ATCTTCTGGA AAGCTATGAG CTCGACGGTC AGGGGGAGGT CATCATCACT
GGGCGTTCCG TGGGTGAGCG AATTGCCAGC GGCCCGGCGC GAATCATTCA GGATGCCGCC
CACCTGAGCG AATTTAAACC CGGTGAGATT CTGGTCGCCG ATACGACCAC GCCGGATTGG
GAGCCTGTCA TGAAGACGGC TGCGGCGGTC GTGACCAACC GCGGCGGGCG TACGTGCCAT
GCGGCAATTA TCGCGCGTGA GTTGGGTATT CCCGCGGTGG TCGGTGCGGG CGAAGCGACG
ACCAAGATTC CCGATGGAGC GACGATCACC GTTTCCTGCG CGGAAGGCGA CAACGGCCGG
ATTTACAAGG GCGCTGTGCC GTTCCATGTC GATACGACGG AAGTGGGTGA TATCGCTCGT
CCGACCACCC AGATCATGAT CAATCTCGGT AACCCTGACC TTGCATTCAA AACCTCATTC
CTGCCGAACG ATGGCGTGGG GCTGGCCCGG ATGGAGTTCA TCATCAACGA GTCCATCAAG
GCGCACCCAC TGGCCTTGTT GCATCCTGAG AAAGTGTCTT CTGCGGCAGA TCGCGCGGCG
ATTGCTCGTC TGACGAGCGG TTATGCCAAT GGCGAAGCCT ACTTCATCGA GCGTCTTTCC
GAGGGTGTGG GGACGATTGC GGCCGCTTTC TGGCCGAAGC CCGTTGTGGT GCGTATGTCC
GATTTTAAAT CGAATGAATA TGCCACCTTG CTGGGCGGTT CGGATTTCGA GCCGGACGAG
GCCAATCCGA TGATTGGTTT CCGTGGTGCT GCCCGCTATG CCCATCCGGC CTACGAGGAA
GGTTTCCGTC TTGAATGTCT CGCCATGAAG CGTGTGCGTG AAGTGATGGG GCTAACCAAT
GTGATTCTCA TGCTGCCCTT TGTTCGTCGC GTGAAAGAAG CCGACGACGT GCTGGCAAAA
ATGGCGGAAT TCGGGCTCAA ACGGGGCGAG AACGGTCTGC AAATCTATGC CATGTGTGAA
ATCCCGAATA ATGTGATCCT GATCGATCAA TTCGCGAAGC GGTTTGACGG TTTCTCGATT
GGCACAAATG ATTTGACGCA ATTGACGCTG GGCGTGGATC GGGATAGCGA GATGGTCGCA
TTCGATTATG ACGAGCGTGA CGACGGCGTG AAGGAGATGA TCCGGCTTGC GGTAGAAGGC
TGCGCGCGCA ACGGCATCCA TTCCGGCCTG TGTGGTCAGG CGCCGTCCGA CTATCCCGAG
ATGGCCGCAT TTCTGGTCGA GATTGGGATT GAGTCCATGA GCTTGAATCC CGATACGGTT
GTTAACACTA CGCGCAAAGT GCTTGAAATC GAAGCGAAGA TGAAAGAAAA GCGCGGCTGA
|
|---|
| Protein sequence | MNKFKYIRFF DELGIDDVPL VGGKNASLGE MYRKLSPAGV RIPNGFAITA EAYHYMLDSA
NAWPALHEAL DTLDPEDVSD LARRGKRARE IVYGAGLPDD LAKEIIAAYR KLQEEYGEDV
GLAVRSSATA EDLPTASFAG QQDTFLNVRG DQSLLDACRR DFASLFTDRA IHYRVDQGFD
HFKIGLSIGV MKMVRSDLSA SGVMFSLDTE SGFRDAVFIT GSYGLGENIV QGAVDPDEFY
VHKPTFAAGH RAVLRRNMGG KAIMMVYMEG DTRNTTRNIP TPTEDRERFC IGDADVLELA
EYAIAIEAHY GHPMDMEWAK DGLDGKMYIV QARPETVASQ RRVNLLESYE LDGQGEVIIT
GRSVGERIAS GPARIIQDAA HLSEFKPGEI LVADTTTPDW EPVMKTAAAV VTNRGGRTCH
AAIIARELGI PAVVGAGEAT TKIPDGATIT VSCAEGDNGR IYKGAVPFHV DTTEVGDIAR
PTTQIMINLG NPDLAFKTSF LPNDGVGLAR MEFIINESIK AHPLALLHPE KVSSAADRAA
IARLTSGYAN GEAYFIERLS EGVGTIAAAF WPKPVVVRMS DFKSNEYATL LGGSDFEPDE
ANPMIGFRGA ARYAHPAYEE GFRLECLAMK RVREVMGLTN VILMLPFVRR VKEADDVLAK
MAEFGLKRGE NGLQIYAMCE IPNNVILIDQ FAKRFDGFSI GTNDLTQLTL GVDRDSEMVA
FDYDERDDGV KEMIRLAVEG CARNGIHSGL CGQAPSDYPE MAAFLVEIGI ESMSLNPDTV
VNTTRKVLEI EAKMKEKRG
|
|---|
| |