| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1357 |
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| Symbol | |
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| ID | 8534513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1467103 |
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| End bp | 1468212 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646383748 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003263238 |
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| Protein GI | 261855955 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAAAC AACGCCTGCA AAAAATTCTG GCCACCCAGG GACTCGGTTC CCGTCGCATG
ATCGAGGGTT GGATCAGTGC GGGTGAGGTT AAATTGAACG GCGTGGTTGC CCAGCTCGGT
GACGTGGCCG AAGCGGGCGA TGTTCTCGAC GTGCGCGGGC AGAAAATCAC TGTTTCCGAC
GAAACACCGA TCCGGCGCGT CATCATTTAT CACAAGCCTG AGGGCGAGAT CACCTCTACT
TCCGACCCGG AAGGTCGTCC AACCGTATTC GGCTCACTTC CCGCCATTCG CCAAGGGCGA
TGGATTACCG TAGGTCGTCT GGATTTCAAC ACATCCGGCC TGCTACTGGC GACCAATGAT
GGCGAGTTGG CCAACCGCTT GATGCACCCG AGCCACCAGA TCGAGCGGAC TTATGCTGTA
CGTGTACTGG GCGGATTAAC CGAGGATCAG GTCAAGCAGT TGACCACCGA AGTCCAGCTC
GATGACGGCC CGGCCCATTT CGATCAACTC AGCGACGCCG GTGGCACTGG GGTGAACCGC
TGGTATCACG TGACCCTGCG TGAGGGGCGG AATCGTGAAA TTCGCCGCAT GATTGAAGCC
GTGGGCGCCG TGGTTTCCCG CCTGATCCGC ATCAGTTACG CGGGCATTCC GTTGCCGCCA
CGCCTCAAGC CGGGGCGCGC GCAGGATCTG CCGCCAGAAA TGGAAGATGC GTTGGTCAAA
CTCGTTGGCC TTCGCCCCGA AACTCGTCGC AAAGTGCAGG ATGAAGACAC CAAGCGGCGC
GCGCTGAAAC CGTATCGGGC CCGTGTGCAA ACCGGCACGG TCGCCAAACG GCCTGCCGAA
CCGTTCCGCG TTCCTGTCCG CGCTGAGTCG CAAGAGGGCG CCGATACTGC TGGCCGACCG
ACATCTCGCC CAATTGAGCG TGCAACAACC CGCTCGAGTC GACCCGGAGA ACCGCGTCCG
GTTTTGTCTC GCGCACGTCC GCAAATGACA GAAGAAGGCT CGGATAAGCG CGGCAAACCC
GCGCGTGCCG GTGGCAAACC GATCCGTCGG GAGCGTCAAG GCACGGCTCG AACCACTGCC
CCAGGGCGGA AACCATCTCG CGGCAGGTAA
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| Protein sequence | MSKQRLQKIL ATQGLGSRRM IEGWISAGEV KLNGVVAQLG DVAEAGDVLD VRGQKITVSD
ETPIRRVIIY HKPEGEITST SDPEGRPTVF GSLPAIRQGR WITVGRLDFN TSGLLLATND
GELANRLMHP SHQIERTYAV RVLGGLTEDQ VKQLTTEVQL DDGPAHFDQL SDAGGTGVNR
WYHVTLREGR NREIRRMIEA VGAVVSRLIR ISYAGIPLPP RLKPGRAQDL PPEMEDALVK
LVGLRPETRR KVQDEDTKRR ALKPYRARVQ TGTVAKRPAE PFRVPVRAES QEGADTAGRP
TSRPIERATT RSSRPGEPRP VLSRARPQMT EEGSDKRGKP ARAGGKPIRR ERQGTARTTA
PGRKPSRGR
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