Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1348 |
Symbol | |
ID | 8534504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1460754 |
End bp | 1461455 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646383739 |
Product | phosphoglycolate phosphatase |
Protein accession | YP_003263229 |
Protein GI | 261855946 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTTG ATACAAAGCT GCCTTCCAAC CAAACTCATC CTGTTCAAGG CGTGCTGTTC GACCTCGACG GGACACTGAT TGATACGGCA CCCGATATGG CACTTGCACT CAATCGCCTG AGGTTGGAAT GTAACTTGCC CCCCATGCCT TTCGAGCAGA TTCGCCCGCA GGTATCCAAT GGTGCGCGGG GCCTGCTGGA GATTGGCTTT CAACTCGGTC CGAATGATCA AGGATTCGCG ATTCTTCGCG ATCGCTTCCT TCAACTCTAT CGGCAGGATA TCGCAGGAGA AACCCGCTTG TTTGCGGGAT TCGATAAAGT GATCGACTGG TTGAATAAGC AAGAAATGCA TTGGGGCATC GTGACCAACA AACCCGGTTT CCTGACTCGG GAACTGGTGA AGGAACTGGA CTTAAAGCCC GCAGTTGTAA TTGCAGGAGA TGACTTACTC CGGCGCAAAC CCTATCCCGA TCAGCTCATT TATGCTGCGG GGCAACTACG GCTGCCACCA CAACACATCC TGTATGTGGG CGACCATGAG CGCGACATAC AAGCCAGCCG AGCCGCACAT ATGCCCTCCG CTGCCGTCCG CTGGGGTTAT CTGGACGGCG AAAGGCCGAT CGAAGACTGG CTGGCCGATG TCATTCTGAC AAACCCCACT GACTTGCTCG ACTTACTCTC ACCAACCCCT AATCCAAACT AA
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Protein sequence | MRFDTKLPSN QTHPVQGVLF DLDGTLIDTA PDMALALNRL RLECNLPPMP FEQIRPQVSN GARGLLEIGF QLGPNDQGFA ILRDRFLQLY RQDIAGETRL FAGFDKVIDW LNKQEMHWGI VTNKPGFLTR ELVKELDLKP AVVIAGDDLL RRKPYPDQLI YAAGQLRLPP QHILYVGDHE RDIQASRAAH MPSAAVRWGY LDGERPIEDW LADVILTNPT DLLDLLSPTP NPN
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