| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1333 |
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| Symbol | |
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| ID | 8534489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1443279 |
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| End bp | 1444649 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646383724 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_003263214 |
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| Protein GI | 261855931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0812757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAG CCACAGAACC GGCACCTATG GCGGTGACGT ACATCACGCA GCCCGGGCGG
GCGAAAATCC AGGGTTCCAT CCGCGTTCCG GGTGACAAAT CCATTTCCCA CCGATCGATC
ATGCTGGGTG CGCTCGCCGA TGGTACGACC GAAATTACCG GCTTTCTTCA AGGGGAGGAT
AGCCTGAACA CACTGCGCTG CTTCCGTGCG ATGGGCGTTG AAATTACTGA GCCCGTTGAG
GGTCGAGTGC GTGTCAATGG TGTGGGTTTG CATGGTTTGA AAGCACCTGC CCATCCTTTG
TACGTGGGTA ACTCGGGTAC ATCGATGCGC TTGATGGCGG GGATTCTCGC TGGACAGTCG
TTCGATACCG TATTGGAAGG CGATGAATCC CTTTCACGGC GGCCGATGAA ACGGGTGATT
GATCCGCTGA CCCAAATGGG CGCGGTCATC GAATCGGCTG AGGGCGGGCG ATCACCACTC
ACTATCCGGG GTGGTCAAAG GTTGCGCGCG ATCGAATACA CCTTGCCGAT GGCCAGTGCG
CAGGTCAAAT CCTGTGTTCT GCTGGCCGGG CTGTATGCCG AAGGCAAGAC CTGCGTGACC
GAACCGGCAC CAACTCGTGA TCACACCGAG CGCATGCTGA CTGGGTTTGG TTATCCGGTG
GCACGCGATG GGTCGACGGC ATGTCTCGAC GGTGGCGGCC AACTTATCGC CCGTCAGATC
GATGTGCCCG CAGATATTTC ATCGGCTGCC TTTTTCATGG TCGCGGCCAG TATCGCGCCT
GAGGCCGATA TCACGCTCGA ACATGTGGGC ATGAATCCGA CGCGCACCGG CGTGATTGAT
ATTCTGAAAC TCATGGGTGC CGACATTACC CTTCACAATC CGCGTGAAGT GGGTGGGGAG
CCCGTCGCGG ATGTCAAGAT CAGAAGTGCG AAGCTGCGCG GAATCGACAT ACCCGAAGCG
CTCGTGCCGC TCGCCATCGA TGAGTTCCCG GCGTTGTTCG TTGCGGCGGC CTGTGCCGAA
GGGCGAACCG TTCTGACGGG TGCCGAGGAA CTCCGCGTTA AGGAATCTGA TCGTATCGCC
GTGATGGCCG ACGGCCTCAA CAAGTTGGGT GTAGAGGCCA CGGCCACCCC GGACGGCATG
ATCATTCAAG GGAAAGGGGC AAACAGCCAA TCCTTTGGTT CTGCAGAAAT ATGGAGTCAG
GGTGACCACC GTATCGCCAT GTCTTTTGCG GTGGCGGGCT TGCGCTCGGT AGGCACGATC
ACGATTCATA ACTGTGAGTT CGTCGAAACT TCATTTCCCG GTTTCGCAGA CCTGTTCCGA
CATTGTGGTG GTGGTCTGGT TGATCAGTTG GTAACAGGTG AACGCGCATG A
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| Protein sequence | MNTATEPAPM AVTYITQPGR AKIQGSIRVP GDKSISHRSI MLGALADGTT EITGFLQGED
SLNTLRCFRA MGVEITEPVE GRVRVNGVGL HGLKAPAHPL YVGNSGTSMR LMAGILAGQS
FDTVLEGDES LSRRPMKRVI DPLTQMGAVI ESAEGGRSPL TIRGGQRLRA IEYTLPMASA
QVKSCVLLAG LYAEGKTCVT EPAPTRDHTE RMLTGFGYPV ARDGSTACLD GGGQLIARQI
DVPADISSAA FFMVAASIAP EADITLEHVG MNPTRTGVID ILKLMGADIT LHNPREVGGE
PVADVKIRSA KLRGIDIPEA LVPLAIDEFP ALFVAAACAE GRTVLTGAEE LRVKESDRIA
VMADGLNKLG VEATATPDGM IIQGKGANSQ SFGSAEIWSQ GDHRIAMSFA VAGLRSVGTI
TIHNCEFVET SFPGFADLFR HCGGGLVDQL VTGERA
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