| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1330 |
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| Symbol | |
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| ID | 8534486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1440826 |
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| End bp | 1442508 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646383722 |
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| Product | ribosomal protein S1 |
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| Protein accession | YP_003263212 |
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| Protein GI | 261855929 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000364638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCTC AATTTGAAAG TTTTGCCGAT CTCTTTGAAG AGAGTCAAAA AAATGCAGTA
ATGCAGCCGG GTGCCATCAT CGAAGGTACC GTCGTTGCGA TCAATGGCGA TTTTGTCGTC
ATCGACACGG GCCTTAAATC TGAAGGTGTG ATTCCCGCAG CCGAGTTTCT TGATGAAAAC
GGCGAATTGA CTGTCAAGGT TGGCGATAAG GTTGATGTCG CACTTGAGTC GGTTGAAGAT
GGTTTCGGCG AAACCAAGCT TTCCCGCGAG AAAGCACTGC GCGCCCGTGC ATGGACCGCG
CTTGAAAAAT CATTCAAGAA CGAAGAAATT GTTACCGGTC GCATCACCGG CAAGGTCAAA
GGTGGCTTTA CCGTCGAGAT GGGCGAAATC CGTGCGTTCC TGCCGGGTTC ACTCGTCGAT
GTGCGTCCGA TCCGCGACAC CACGTACCTC GAAGGTAAGG ATGTCGAATT CAAGATCATC
AAGCTTGACC AGAAACGCAA CAACGTAGTG GTATCTCGCC GTGCCGTTGT TGAGCAAGAG
TACAGCGCCG AACGCGATGC GCTGCTCGAC CAGTTGCAAG AAGGCATGGT TCTGCGCGGG
GTCGTCAAGA ACCTCACCGA TTACGGTGCG TTCCTTGACC TCGGCGGCAT CGATGGCCTG
CTGCACATTA CCGACATGGC GTGGAAGCGT GTCAAGCATC CTTCTGAAGT GGTGAACATC
GGTGATGAAG TCGACGTTAA GGTATTGAAG TTCGACCGTG ATCGTAACCG CGTATCACTG
GGCATGAAGC AAATGGGCGA AGACCCATGG AGCGATCTGG CTCGCCGATT CCCGATCAGC
AGCCGTATGT TCGGTAAAGT GACCAACCTG ACTGACTACG GTTGCTTCGT TGAAATCGAC
AACGGTGTTG AAGGTCTGGT TCACGTTTCA GAAATGGATT GGACCAACAA AAACGTCAAT
CCAGGCAAAG TCGTCTCTGT CGGCGACGAA GTCGAAGTCA TGATTCTGGA TATCGACGAA
GAACGCCGCC GTATTTCTCT GGGCATGAAG CAGTGCCAGG CCAATCCTTG GGATGCCTTC
GCTGCTTCGC ACCAGAAGGG CGACAAGGTT AGCGGTCAAA TCAAATCGAT CACTGACTTC
GGTGTGTTCA TTGGTCTGGA TGGCGGCATC GATGGCCTGA TCCACCTGTC TGATCTTTCT
TGGAACGAAG CAGGCGAAGA AGCCGTGCGT CAGTTCAAGA AAGGCGAAGA AATCGAAGCG
GTTGTCATCG CGATCGATCC AGAGCGCGAA CGTATTTCTT TGGGCTTGAA ACAGCTTGAA
AGCGACCCGA TCGGCGACTA CGCTGCCGAT AACCAGAAGG GCAAAATCGT GAACGGTACC
GTTCGTGAAG TTGATGCTCG TGGTGCCGTG ATCGATCTCG GCGAAGGCGT CGAAGGTTAC
TTGCGTGCCT CTGACATCTC CCGTGACCGC ATCGACGATG CACGCACCGT CCTCAAGGAA
GGTGATGCCG TTGAAGCCAA GGTGATGGGC GTTGATCGTA AAAACCGTAT GGTCAGCCTC
TCTATCCGTG CCAAGGATTC TCAGGAAGAG TCCGAAGCAA TGGAAGAATT GAGCAGCCGC
GCTACCGTCA GCAACCCGAC CTTGGGTGAT CTGCTGAAAG AACAGCTCAA TCGCTCTGAA
TAA
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| Protein sequence | MSAQFESFAD LFEESQKNAV MQPGAIIEGT VVAINGDFVV IDTGLKSEGV IPAAEFLDEN
GELTVKVGDK VDVALESVED GFGETKLSRE KALRARAWTA LEKSFKNEEI VTGRITGKVK
GGFTVEMGEI RAFLPGSLVD VRPIRDTTYL EGKDVEFKII KLDQKRNNVV VSRRAVVEQE
YSAERDALLD QLQEGMVLRG VVKNLTDYGA FLDLGGIDGL LHITDMAWKR VKHPSEVVNI
GDEVDVKVLK FDRDRNRVSL GMKQMGEDPW SDLARRFPIS SRMFGKVTNL TDYGCFVEID
NGVEGLVHVS EMDWTNKNVN PGKVVSVGDE VEVMILDIDE ERRRISLGMK QCQANPWDAF
AASHQKGDKV SGQIKSITDF GVFIGLDGGI DGLIHLSDLS WNEAGEEAVR QFKKGEEIEA
VVIAIDPERE RISLGLKQLE SDPIGDYAAD NQKGKIVNGT VREVDARGAV IDLGEGVEGY
LRASDISRDR IDDARTVLKE GDAVEAKVMG VDRKNRMVSL SIRAKDSQEE SEAMEELSSR
ATVSNPTLGD LLKEQLNRSE
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