Gene Hneap_1323 details

Gene Information

• Locus tag: Hneap_1323
• ID: 8534479
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 1434885
• End bp: 1435424
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 646383715
• Product: 20S proteasome A and B subunits
• Protein accession: YP_003263205
• Protein GI: 261855922
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAACT TTCGCGGCAC CACTATTTTA TGTGTGCGTA AAAACGGCCA AACCGTCATT 
GGCGGCGATG GACAAGTCAC GCTGGGCAAC ACGGTCGTCA AAGGCAATGC TCGCAAGGTA 
CGGCGACTCT ACAACGGCGA TGTGCTGGCC GGATTCGCTG GGGCAACCGC CGATGCGTTT 
ACCCTGTTCG AGAAATTCGA AGCCAAACTG GAAAAATTTG GCGGTAATTT GCTCCGTTCC 
GCTGTCGAGC TTGCCAAGGA ATGGCGCACC GATCGCGCCA TGCGCCGACT GGAGGCTATG 
CTGGTTGTCG CCGATCGCAC GCACATGCTT ACCATCAGCG GCAATGGTGA CGTGATCGAA 
CCCGAAACCG ACCTGATCGC CATCGGTTCG GGCGGCGCCT TCGCACAAGC AGCCGCCACC 
GCACTGATGC AGCATTCCGC ACTAGAAGCC CGCGCGATTG CCGAAGCCGC GCTCAATATT 
GCTGGCGATA TCTGCATCTA CACCAACCAC AACCTCACGA TTGAAGTACT CGACGCATGA 

 

Protein sequence

MENFRGTTIL CVRKNGQTVI GGDGQVTLGN TVVKGNARKV RRLYNGDVLA GFAGATADAF 
TLFEKFEAKL EKFGGNLLRS AVELAKEWRT DRAMRRLEAM LVVADRTHML TISGNGDVIE 
PETDLIAIGS GGAFAQAAAT ALMQHSALEA RAIAEAALNI AGDICIYTNH NLTIEVLDA