| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1320 |
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| Symbol | |
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| ID | 8534476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1430827 |
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| End bp | 1432740 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646383712 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_003263202 |
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| Protein GI | 261855919 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.865645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACGA TTACCCTGCC CGATGCGTCA CAACGTACAT TTGAGAACCC CGTTACCCTT
GGTGAAATCG CGGCTGATAT CGGCCCGGGA TTAGCGAAAG CAGCCATCGC CGGCAAGATT
GACGACAAGC TCGTCGATTT GTCCCGCGTG GTCGATCACG ATGCACGAAT TGCCATTGTG
ACCGCCAAGG ATCCGGAAGG GCTGGAGGTT ATCCGCCATT CAACGGCGCA CTTGATGGCG
CAAGCGGTCA AGCAGCTTTA TCCGAGCGCA CAAGTCACCA TTGGTCCGGT GATCGACAAC
GGGTTCTACT ACGATTTTTA TTTCGAGCGC CCCTTCAATG ATGAAGATCT GGCGGCGATC
GAAGCGCGAA TGCATGAGCT TGCTGCGAAA GGTGATGACT TAACTCGTCG TGTCGTTGAT
CGATCTGAAG CCGTGCAATT CTTCGATCAA TTGGGTGAAG AGTTCAAGGT CGAGATTATT
CAGAGTATTC CAGAAGCGGA AGAGCTGACT TTATATACAC AAGGCGACTT CACCGACTTC
TGTCGTGGCC CCCATGTGCC GAATACGAAC CGGCTCAAAG TATTCAAGCT GATGAAGGTG
GCCGGCGCGT ATTGGCGTGG TGATGCCAAA AACCCCATGC TCACGCGAAT CTACGGCACG
GCGTTTGCCA GCGACAAGGA GCTGAAGGTC TACCTGAATC AACTGGCCGA GGCCGAAAAG
CGCGATCACC GTCGCATCGG CAAGCAGCAG AACCTGTTTC ACTTTCAGGA AGAAGCACCG
GGGCTGGTGT TCTGGCATCC CAAGGGTTGG GCCTTGTGGC AAGTGATCGA GCAGCATATG
CGCGGCATTT ATCGATCATC TGGCTATGAC GAAATTCGCT GTCCGCAAAT TTTGGACGTG
TCGTTGTGGA AAAAATCGGG CCATTGGGAC AACTATCAGG AAAACATGTT CTTCACCGAA
TCGGAGAAGC GCACGTTTGC CGTCAAGCCG ATGAACTGCC CGGGTCATGT GCAGGTGTTC
AATCATGGTT TGCACAGTTA TCGGGACTTG CCGATCCGTT ACGGCGAGTT TGGTTCGTGT
CATCGCAACG AACCTTCGGG CGCGCTGCAC GGCATTTTGC GCGTACGCGG GTTTACGCAG
GATGATGGCC ACATCTTCTG TATGGAGAGT CAAATCGAGT CCGAGGTCAA GGCCTTCCAT
GAACAGGCGT TGTCTGTGTA TGCGACCTTC GGTTTTACCG ACATTCAAGT AAAAATCGCC
CTGCGTCCGG ACAAGCGTCT GGGCTCTGAT GTCGTGTGGG ATGAAGCCGA GGCTGCCCTG
CGCGGTGCCT TGCGTGCAGC CGGTGTGGCG TGGACGGAAT TGCCGGGCGA AGGGGCTTTC
TACGGTCCCA AGATCGAATA TCACTTAAAA GACGCGATTG GGCGGACTTG GCAGTTGGGC
ACGATTCAGG TTGATTTCAT GATGCCCGAG CGCCTTGGTG CGACCTATGT GGATGAGCAC
AGCGAGCGTC GCCACCCTGT CATGTTGCAC CGCGCTATTG TTGGCTCGAT GGAGCGCTTT
ATCGGGATTC TTATTGAGCA CCATGCCGGG ATGCTGCCGT TCTGGCTTGC GCCGATTCAG
GTTGTTGTGA TGGGGATTAC CGATAAGCAT GCGGGTTATG TGCAACAGCT CACGGCCAAA
CTCAAGGCAT CTGGGATACG CGTCGTTGAA GACCTGCGCA ATGAAAAGGT CGGTTTCAAG
ATTCGCGAGC ATACCTTGGA ACGCGTGCCT TATCTTCTCG TGGCAGGTGA TCGGGAAATG
GAGACCGAAT CCATTGCTGT TCGTACGAGG GAGGGCACTG ACCTCGGTGT CATGGCTGTG
ACTGATTTGC TTGAGAAATT GCAATCAGAA TCTCGCGCAC CCGGCGTAGT GTGA
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| Protein sequence | MLTITLPDAS QRTFENPVTL GEIAADIGPG LAKAAIAGKI DDKLVDLSRV VDHDARIAIV
TAKDPEGLEV IRHSTAHLMA QAVKQLYPSA QVTIGPVIDN GFYYDFYFER PFNDEDLAAI
EARMHELAAK GDDLTRRVVD RSEAVQFFDQ LGEEFKVEII QSIPEAEELT LYTQGDFTDF
CRGPHVPNTN RLKVFKLMKV AGAYWRGDAK NPMLTRIYGT AFASDKELKV YLNQLAEAEK
RDHRRIGKQQ NLFHFQEEAP GLVFWHPKGW ALWQVIEQHM RGIYRSSGYD EIRCPQILDV
SLWKKSGHWD NYQENMFFTE SEKRTFAVKP MNCPGHVQVF NHGLHSYRDL PIRYGEFGSC
HRNEPSGALH GILRVRGFTQ DDGHIFCMES QIESEVKAFH EQALSVYATF GFTDIQVKIA
LRPDKRLGSD VVWDEAEAAL RGALRAAGVA WTELPGEGAF YGPKIEYHLK DAIGRTWQLG
TIQVDFMMPE RLGATYVDEH SERRHPVMLH RAIVGSMERF IGILIEHHAG MLPFWLAPIQ
VVVMGITDKH AGYVQQLTAK LKASGIRVVE DLRNEKVGFK IREHTLERVP YLLVAGDREM
ETESIAVRTR EGTDLGVMAV TDLLEKLQSE SRAPGVV
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