| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1307 |
|---|
| Symbol | |
|---|
| ID | 8534463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 1414491 |
|---|
| End bp | 1416107 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646383699 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003263189 |
|---|
| Protein GI | 261855906 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGAT TATTGGATAA ACAACGTACG ATCGCCGGAG CGCAATTCAA CCGCTGGCTG
GTTCCACCAG CCGCCCTTGC CATTCATTTA TGCATCGGCA TGGCCTATGG ATTCTCCGTT
TTCTGGCTTC CGATGACGAA ACTCGTGGGA CAGAGCTCAA CCGAATGCAG CAGTCATTCT
TGGATGACAA ACCTGTTTTC CAGTCAATGC GATTGGACCG TGCCGCAAGT CAGTATCACC
TTTACCTTGT TTATCTTCAT GCTGGGAGTT GCGGCCGCTT TCTGGGGCGG ATGGATGGAA
CGCGTGGGCC CACGCAAATC GGGCTTTATT GCGGCTATTT GTTGGGGTGG CGGCATGGCT
CTTGGCGGAG TCGGTGTCAT GACACACCAA CTCTGGCTGG TGTGGCTCGG TTGCGGCGTT
CTCGGCGGAA TTGGCCAGGG TCTGGGCTAC ATCACCCCAG TATCGACGCT CATTAAATGG
TTCCCTGACC GTAGAGGCAT GGCAACCGGT CTCGCCATCA TGGGCTACGG TGGGGGCGCC
ATGATTGGGG CCCCTGTCGC GGTTGCCTTG ATGAGTCATT TCGGTGGCGG CGTATCGGCT
CAAGGCGTCG CGCTTACGCT CATCACCATG GGTGCGATTT ACTTTGTGAT CATGACCATC
GGCGCTTTCG GTTTCCGAGT TGCTCCCGCC GGGTGGATGC CGACAGGTTT CAAGCCCACA
CCGACACAAT CCAAAGCGAT GATCACCGAT GGCCATGTGC ATCTTTCCAA GGCTTGGCGG
ACACCCCAGT TCTGGCTGAT ATGGGGCGTA CTGTGCCTCA ATGTGAGCGC CGGTATTGGC
GTCATCGGGA TGGCTTCGCC CATGCTGCAG GACATTTTCG GCCCCTTGCT GGTTGGTGTC
ACAAGTGACG CCACACTGAC TGCGGCTCAA AAGGCCGGGA TTGTGGCCGC CGCCGCCGGA
CTGGTGGGTC TGATCAGCCT GTTCAATAGC GTGGGCCGGT TGTTCTGGGC TTCGGTATCG
GACTGGATTG GACGCAAGAA CACTTATTTC ACGTTTTTCA TACTCGGTAC GGCTCTGTAT
CTGTTGATGC CCACACTGGG ACACATGGGC GCAGCGGGCC TTTTCGTGCT CGTGGTCTGT
GTCATCCTGA GCATGTATGG CGGTGGATTT GCCACCGTGC CCGCTTATCT GGCGGACATT
TTCGGCACTC AGATGGTCGG AGCCATTCAT GGCCGCCTGC TGACGGCGTG GTCTGTCGCT
GGCATTATTG GCCCGGTTTT GATATCCAAT TTACGACAGG CCCAGCTTGA TGCAGGCGTA
CCCAAGAATT TGGTGTACGA CAACACGCTG TATATTTTGG CCGGTTTATT GATTTTGGGC
TTTTTCCTGA ACTTGATGAT CAAGCCGGTT GATGCGAAAC ACTTCATGAC ACCCGATGAA
CTGGCTGCGG AACAAGCACT AACCGAAAAA GCCAGCCACA AAGCAGCCGA TGCCGGTTCC
GCTGCACGCG GCAGTTTTGG TATGACCGGT ATATTGGCCT GGCTGGCCGT TGGCATTCCC
TTCCTGATCG GTGTTTGGAT CGCCATCGGC AAAGCTTCGG CACTCTTCAT GCACTGA
|
|---|
| Protein sequence | MSGLLDKQRT IAGAQFNRWL VPPAALAIHL CIGMAYGFSV FWLPMTKLVG QSSTECSSHS
WMTNLFSSQC DWTVPQVSIT FTLFIFMLGV AAAFWGGWME RVGPRKSGFI AAICWGGGMA
LGGVGVMTHQ LWLVWLGCGV LGGIGQGLGY ITPVSTLIKW FPDRRGMATG LAIMGYGGGA
MIGAPVAVAL MSHFGGGVSA QGVALTLITM GAIYFVIMTI GAFGFRVAPA GWMPTGFKPT
PTQSKAMITD GHVHLSKAWR TPQFWLIWGV LCLNVSAGIG VIGMASPMLQ DIFGPLLVGV
TSDATLTAAQ KAGIVAAAAG LVGLISLFNS VGRLFWASVS DWIGRKNTYF TFFILGTALY
LLMPTLGHMG AAGLFVLVVC VILSMYGGGF ATVPAYLADI FGTQMVGAIH GRLLTAWSVA
GIIGPVLISN LRQAQLDAGV PKNLVYDNTL YILAGLLILG FFLNLMIKPV DAKHFMTPDE
LAAEQALTEK ASHKAADAGS AARGSFGMTG ILAWLAVGIP FLIGVWIAIG KASALFMH
|
|---|
| |