Gene Hneap_1271 details

Gene Information

• Locus tag: Hneap_1271
• ID: 8534425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: -
• Start bp: 1374991
• End bp: 1376874
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 646383662
• Product: penicillin-binding protein 2
• Protein accession: YP_003263154
• Protein GI: 261855871
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATTC GAGAAGCTAT TCGTGATGCA CATCTGAATC GTGCCCATGA TCGCCGCCTG 
AACGACAAGC ATTTCAGTCG ACAGATTTTT CGTCGCCGAG TGTTCTTGGC GGCACTGATT 
GCTTTATTGG TGTTTACTGT TCTGTTGTGG CGAGCCGCCT TTTTGCAGGT GGATCGTCAT 
GCCCATTTTT CCGAGATGGC GGAAAACAAC CGCACACGAA CATTGGTGAT CCCGCCTGAG 
CGGGGTCGCA TTTTTGACGA TGGCGGCCGC GTTGTGGCCG ACAATGTGGC TACGTATCAG 
GCGCAAATCG TTCCTGAAGA TACGGTTGAT CTCAAACGTG AACTCTCGAT GCTGCAGCAG 
GTGCTTAAGC TCGATGACGA CACGTTGCAC GATCTGAAAG AACGGATCAA ATTCGGTCGT 
TCATTCGATC CGATTCTGGT CAAGTCGGAT CTGACAGCCG TGGAAATGGC CAAGCTGGCC 
CAGTTGCAAC CTTGGTTGGC CGGTGTCTCC GTGGAATCCA GCTTAAAGCG GGTTTATCCC 
TACCGGCAGC TTTTGGCTCA TGTGGTCGGC TACGTTGGTC GAATCAACGT GGCCGATCTC 
AAACGAATCA ATGCAGACTT GTATCAGGGG ACGCAATACA TCGGCAAGTC CGGCATCGAG 
CGTGAATACG AAGATGACTT GCACGGCAAG CCCGGTTTCA AGACAGTTGA AGTTGATGCC 
GTGGGGCGTG TCGTCAAGGT GCTCAAAGTT GTACCACCGG TTGCAGGTAA AGATATCCAC 
CTCACGCTGG ATGTGCCATT ACAGGGTATC GCGGCGGCGG CACTCGGTTC GTACAGTGGT 
GCCGTGGTGG CGCAAGACCC GGCGACGGGC GCGATCAAGG CGATGGTGTC ACGGCCGAGT 
TTTGATCCCA ACCTGTTTGT CGATGGCATC AGTCACAAGA ACTATCAGAC GCTGCTGAAC 
GATCCTGAGC GCCCCTTGTT TGATCGGGCC ATCACGGCTA CCTACCCACC GGGTTCGACC 
ATCAAGCCCG TCATGGCCTT GGCGGGCTTG CAATATGGTT TCCTCGACCC GAACAAGAAA 
TTCTTCGCCG GTCCGTATTT CCAGATTCCC GGTGACAAAC ACCACTATCG TGACTGGCGC 
AAATGGGGAC ACGGCTGGGT TGATCTGGAT CAAGCCATCA CGCAGTCTTG TGACGTGTAT 
TTCTATGATC TGGCCTATCG CATGGGCATC GATCCTATGC ATACGTTCTT GACTGAGTTC 
GGTTTGGGGC GAAAAACCGG GATTGATCTG CCCGGTGAGT CGTCTGGTCT GGTGCCATCG 
CCCAAGTGGA AGCGGAAAAC CAAGAATTTA CCCTGGTATC CCGGCGAGAC GGTTATTGCG 
GGTATCGGGC AGGGGTATAT GCTGACCACG GTATTGCAAT TGGCGCAAAC CACATCGATT 
CTTGCCGAAT CCGGAAAGCG TTATCGCCCT TGGTTGGTGG CTAGCAATGA AGACAAAGAG 
CCCAGCATAG AGCTCAAGAG TCAAAGCTTC TGGAATGACG TGCGCCACGG TATGTTTGAT 
GTCATCAACA GTCCGCACGG CACGGCAAGA AGGATAGCTG CCCCGTATCT TATTGCCGGA 
AAAACGGGCA CCGCCCAGGT TTTCACCGTA GCGCAAAATG CGAGCTATAA CGCCAAGGAT 
CTGGCGAAGA AACTCCACGA TCATGCTGTA TTCATCGGGT TTGCACCGTA TGACGATCCT 
AAGATCGCAG TGGCAGTGCT GGCCGAGCAT GGGGGAAGCG GCTCGGGGAC GGCTGCTCCT 
GTGGCCCGAC GCGTGATGGA CTATTACCTC GGGTTCGAAC CCAAAAAGAC AGTGAAGATG 
GAGTTCGTGA AACATGGCGA CTGA 

 

Protein sequence

MSIREAIRDA HLNRAHDRRL NDKHFSRQIF RRRVFLAALI ALLVFTVLLW RAAFLQVDRH 
AHFSEMAENN RTRTLVIPPE RGRIFDDGGR VVADNVATYQ AQIVPEDTVD LKRELSMLQQ 
VLKLDDDTLH DLKERIKFGR SFDPILVKSD LTAVEMAKLA QLQPWLAGVS VESSLKRVYP 
YRQLLAHVVG YVGRINVADL KRINADLYQG TQYIGKSGIE REYEDDLHGK PGFKTVEVDA 
VGRVVKVLKV VPPVAGKDIH LTLDVPLQGI AAAALGSYSG AVVAQDPATG AIKAMVSRPS 
FDPNLFVDGI SHKNYQTLLN DPERPLFDRA ITATYPPGST IKPVMALAGL QYGFLDPNKK 
FFAGPYFQIP GDKHHYRDWR KWGHGWVDLD QAITQSCDVY FYDLAYRMGI DPMHTFLTEF 
GLGRKTGIDL PGESSGLVPS PKWKRKTKNL PWYPGETVIA GIGQGYMLTT VLQLAQTTSI 
LAESGKRYRP WLVASNEDKE PSIELKSQSF WNDVRHGMFD VINSPHGTAR RIAAPYLIAG 
KTGTAQVFTV AQNASYNAKD LAKKLHDHAV FIGFAPYDDP KIAVAVLAEH GGSGSGTAAP 
VARRVMDYYL GFEPKKTVKM EFVKHGD