| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1264 |
|---|
| Symbol | |
|---|
| ID | 8534418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1368649 |
|---|
| End bp | 1369284 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 646383655 |
|---|
| Product | lipoate-protein ligase B |
|---|
| Protein accession | YP_003263147 |
|---|
| Protein GI | 261855864 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0321] Lipoate-protein ligase B |
|---|
| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0529911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTGA TTGACTACGG TATCGATTGC GATTACGCCG TTCTTCTAGC GAAAATGCAG
TCGTTTACTC AATCACGCCA ACCACATACT GAAGATGAGT TCTGGGTGCT GAGCCACCGC
CCAGTTTTTA CACAGGGTTT GAATGGACAG CCCCGGCACG TACTTGATCC CGGTAATATA
CCGGTCGTAC AAACTGATCG AGGCGGGCAG GTTACTTATC ATGGTCCGGG GCAATTGGTG
GTTTATACCC TGGTCGATCT CAAGCGTGCC GGAGTTGGTG TGCGTGAATG GGTCACGGTG
CTTGAGCAAG TCGTCATTGA ATATCTCGCG ACATTCGAGG TTCATGCAGA GCGGCTTTCA
GGAGCGCCCG GCGTTTATGT GAACGGTGCT AAAATTGCCG CGCTCGGGCT CAAAGTTCGC
CAAGGGCGTT GCTACCATGG CCTGTCGTTA AATCTGGACG TTGATCTGGC ACCCTTCGCG
CGAATCAATC CCTGCGGCAT GGCAAATTTG CCGGTGACCG ACCTGCGTCG TTGCGCGAAG
ATCAAAACCG ATGAATTGCC TGATTACCGT CAAGCAGGCC GCTCAATTGT GTTAGGTTTA
CAAAAAATAC TACTGGAACA GTCCCCAATG GCGTAA
|
|---|
| Protein sequence | MSLIDYGIDC DYAVLLAKMQ SFTQSRQPHT EDEFWVLSHR PVFTQGLNGQ PRHVLDPGNI
PVVQTDRGGQ VTYHGPGQLV VYTLVDLKRA GVGVREWVTV LEQVVIEYLA TFEVHAERLS
GAPGVYVNGA KIAALGLKVR QGRCYHGLSL NLDVDLAPFA RINPCGMANL PVTDLRRCAK
IKTDELPDYR QAGRSIVLGL QKILLEQSPM A
|
|---|
| |