| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1255 |
|---|
| Symbol | |
|---|
| ID | 8534409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1358670 |
|---|
| End bp | 1359215 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646383646 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003263138 |
|---|
| Protein GI | 261855855 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0326768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAG GTCTGCTTTT GCTGTCCTCA TTGATTATGG TTTTGAGTCT GGCCTGGTCT
GGTGCTGTTC TTGCAGCATT AAAGGTCGGC GAGACTGCAC CATCGTTTAA TTTACCTGAC
CAAAAAGGAG TCATGCATTC GCTTGCCGAT TATCGCGGAA AGTGGTTGGT GCTTTATTTT
TATCCCAAGG ATGAGACACC GGGTTGTACG ACCGAAGCGT GTACCTTCCG CGATGACATT
GCCACCATTC AGAGTATGGG CGCCGTGGTA GTTGGCATTA GTGAAGACAG CATCGATAGC
CACGCACGAT TTGCGAAAAA ATACCATCTC CCATTTACCT TGCTTGCAGA TGACGATGGC
GCGACGGCCC AAGAGTATGA TTCGCTGTTT TCCATTCTCG GGATGATGAA ATTTGCCAAA
CGGCATACCT TCATCATCAG TCCGGATGGA CGCTTGGCTG CAAAATTCAT GGATGTTGAT
CCAGATGACC ACAGTAAAAA CGTCATCGCC AAGCTCACGT CTTTGATTAA TGGCTCGCCA
AAATAG
|
|---|
| Protein sequence | MKSGLLLLSS LIMVLSLAWS GAVLAALKVG ETAPSFNLPD QKGVMHSLAD YRGKWLVLYF
YPKDETPGCT TEACTFRDDI ATIQSMGAVV VGISEDSIDS HARFAKKYHL PFTLLADDDG
ATAQEYDSLF SILGMMKFAK RHTFIISPDG RLAAKFMDVD PDDHSKNVIA KLTSLINGSP
K
|
|---|
| |