| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1235 |
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| Symbol | |
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| ID | 8534389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1337175 |
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| End bp | 1338710 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383626 |
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| Product | deoxyribodipyrimidine photolyase-related protein |
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| Protein accession | YP_003263118 |
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| Protein GI | 261855835 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3046] Uncharacterized protein related to deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00923753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCAAC TCATTGTCAT TTTGGGAGAT CAACTTAATC GCAACAGTGC GGTTTTCGAT
GGGTTCGATC CCGCCCAGGA TGCAGTATTC ATGGCCGAGG CAACCGGCGA GGCCGCCCAT
GTCTGGTCGC ACAAGCTGCG TATTGCCCTG TTCTTCAGTG CCATGCGGCA TTTTGCTGCG
GCCCTGAGAA GCGAAGGCTT AACGGTTCAT TACGCCCAGA TCGGTTCACC CCCCCACGGG
GCTTTGGCCG ATGCCCTTGC CGCGGCCATC GTGGTGCATC AACCGCAGCA AGTCGTATGG
GTATCGGCTG GTGCCGAACG CCTGAATCAT GCACTGAAAG CGACCTGTGA TCAGCACAAA
GTGCCCTGGA AAATCTATCC GGACCGACAT TTCATTGCCA CCGAAAACCA GTTTTCGGAC
TGGGCAAAGG GCCGAAAATC TTTGCGACTG GAGTATTGGT ACCGCCAGCT TCGCCAGCAG
ACTGGTCTGT TGATGGAGGA TGATCAGCCC ATCGGGGGCG CGTGGAATTT TGATGCACAG
AATCGTGCAG CATTCGATAC ACGCGGACCT GGCCTATTGC CTGCCCCCAT GGGCTTTCCG
CCCGATGCCA TTACCCAACA GGTCATCGAA ACCGTAGCGC GCTATTTTCC GGGGCATCCG
GGCGCATTGG ACGGGTTCGA CTGGCCGATC ACGCGAGAGC AGGTAGAAGC CGCACTCGAA
GATTTCATCA CCCATCGACT GCCGCTGTTC GGTCACTATC AGGATGCGAT GTGGACGGAT
GAGCCTTGGC TTTATCACAG CAGACTCTCA GCCGCGCTCA ACCTCAAGCT TATCGATCCG
GCTACCGTCT GTCGTGCCGC AGAGGCGGCA TACCGTCAGG GACAAGTGCC GTTGGCCGCG
GCGGAGGGAT TCATCCGGCA GATACTGGGC TGGCGGGAGT ATGTCCGCGG GCTTTATGCT
CATTATGGCG ATGAATGGCT CGACATGAAT GCATTGAACG CCCAGCATGA TTTACCGGAT
TTTTTCTGGA CGGGCGACAC ACCGGCCCAC TGTCTGAGCC AGACAATCGG TCAGACCATG
CGAACGGGTT ACGCTCATCA TATTCAACGG TTGATGGTGA CCGGTTTATA TTGCCTGCTC
GCAGGCGTTC GACCTCGGGC TGTGCATGAA TGGTATCTGG CCGTCTACGT CGACGCAGTG
GAATGGGTTG AGATACCGAA TGTGATCGGC ATGAGCCAAT TCGCCGATGG CGGAATCATG
GCATCCAAGC CCTATATCGC CAGTGGCAGC TATATCGATC GAATGAGCAA TTATTGCGCA
CACTGCTCGT TCCATCCCAA GGAGGCGGTG GGTGCAAAGG CCTGCCCGTT CACGACACTG
TACTGGGCTT TTCTGGACCG ACACGAAAAG CGTTTTGCCC AGCACCCCCG TCTTGCCCTG
CAGGTCAAGA ACCTGCAACG AAAATCGGCG GAAGAACGGG CGTTAATCCG CGCACAAGCT
GAATCTCATT TAGCCGGTGT GATGCAAAAA CCTTAG
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| Protein sequence | MRQLIVILGD QLNRNSAVFD GFDPAQDAVF MAEATGEAAH VWSHKLRIAL FFSAMRHFAA
ALRSEGLTVH YAQIGSPPHG ALADALAAAI VVHQPQQVVW VSAGAERLNH ALKATCDQHK
VPWKIYPDRH FIATENQFSD WAKGRKSLRL EYWYRQLRQQ TGLLMEDDQP IGGAWNFDAQ
NRAAFDTRGP GLLPAPMGFP PDAITQQVIE TVARYFPGHP GALDGFDWPI TREQVEAALE
DFITHRLPLF GHYQDAMWTD EPWLYHSRLS AALNLKLIDP ATVCRAAEAA YRQGQVPLAA
AEGFIRQILG WREYVRGLYA HYGDEWLDMN ALNAQHDLPD FFWTGDTPAH CLSQTIGQTM
RTGYAHHIQR LMVTGLYCLL AGVRPRAVHE WYLAVYVDAV EWVEIPNVIG MSQFADGGIM
ASKPYIASGS YIDRMSNYCA HCSFHPKEAV GAKACPFTTL YWAFLDRHEK RFAQHPRLAL
QVKNLQRKSA EERALIRAQA ESHLAGVMQK P
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