| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1221 |
|---|
| Symbol | |
|---|
| ID | 8534375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1322128 |
|---|
| End bp | 1323432 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 646383612 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003263104 |
|---|
| Protein GI | 261855821 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA CTGATAAAAA ACCACATGTA GTAATTTTGG GTGGCAATTT TGCCGGCTTG
GGCAGCGCTC AGAAAATCCG CCAATATGCA GGCGATGCAA TTCAAATTAC CGTAATAGAT
CGAAAGGATT ACTTGTTATT TGTGCCGAAT ATTCCGGCCG ATGTGTTTGA GAACAGAAAT
CCGGCCATGC ATCAGCGTAT GGAATTGCGC GACGTGCTCG CCCACGATCA AATTAATTTC
ATCCAAGCCG AGGTGAATGC CATTGATGTT GATTCCGAGA TGGTGCACAT CACGCCCAAC
GAACGTCCGG GCGCTGCTGC TGTGACGTTG AGTTACGACT ATCTGGTGGT CGCCTTGGGT
AATCGTTTGG CTTTTGAAGA CATTGAAGGC TTTGCCGAGT TTGGCGATAG CGTCAGTGAC
CTATATCTGG GTGAGCAATT ACGCCAGAAA TTGCACTTTG GTGGCTACAA GGGTGGACCG
ATTGCCATCG GCTCCGCGCG TTTTCATCAA GGGGACGGTG CCAAAGGGCT GGAACCTTAT
CCCAGTGGCA GTATCCCCGA TGCGCTCGCC GCCTGTGAAG GCCCACCGGT TGAAGTCATG
ATGGCCGCTG CACACTATTT GGCAGAGACC AAACAGGGTG ACCCGAGCAA AATCACCGTA
TTCACGCCCG CTGAACTGAT TGCCGAAGAT GCGGGTGAAA CGGTCGTCAA GCAGTTGCTG
GATCTGGCGA CCCAGATGGG CTTTAACTAT CTCAACAACA CGCAAGACAT CAAGCGGATT
ACGCAAGATG GCATCGAGTT TGCTGACGGC CGATCCGTGG AAGCGGAACT GAAAATCATT
TTCCCGGATT GGAAGGCGCA TGAGTTTATG CGTGGTTTGC CGATCAGCGA CAGCGAAGGG
TTTGTCGTTA CCGATTTGCT GATGCGCAAC CCCAAGTACA AAAACGTTTT TGCCGCCGGG
GACGCCGCTG CAGTGACCAT GCCGAAACTT GGGGCAATCG GCCATCAGGA ATGCGAGATC
GTCGGCTTGC AGATTGCCAA AGACCTAGGG CGACTATCGC CCGAACAAGC GGACAAGCCG
TTGCAACCGG TGGTGTATTG CATCGGTGAT ATGGGCGGCG GCAAAGCCTT CTATATTCGC
TCGAATACCT GGTTTGGCGG TGATGAGGCG GTGCTCAAAA TGGGCCATGT GCCGTACATG
CTCAAGATGC AATACCGGAC GCTCTTCATG CATAACAAAG GCAAAGTGCC TTCTTGGGGG
CTTGATTTTG CGGAAATGGC CGTTGAGCAC CATATCCCCA AGTAA
|
|---|
| Protein sequence | MNATDKKPHV VILGGNFAGL GSAQKIRQYA GDAIQITVID RKDYLLFVPN IPADVFENRN
PAMHQRMELR DVLAHDQINF IQAEVNAIDV DSEMVHITPN ERPGAAAVTL SYDYLVVALG
NRLAFEDIEG FAEFGDSVSD LYLGEQLRQK LHFGGYKGGP IAIGSARFHQ GDGAKGLEPY
PSGSIPDALA ACEGPPVEVM MAAAHYLAET KQGDPSKITV FTPAELIAED AGETVVKQLL
DLATQMGFNY LNNTQDIKRI TQDGIEFADG RSVEAELKII FPDWKAHEFM RGLPISDSEG
FVVTDLLMRN PKYKNVFAAG DAAAVTMPKL GAIGHQECEI VGLQIAKDLG RLSPEQADKP
LQPVVYCIGD MGGGKAFYIR SNTWFGGDEA VLKMGHVPYM LKMQYRTLFM HNKGKVPSWG
LDFAEMAVEH HIPK
|
|---|
| |