Gene Hneap_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1187 
Symbol 
ID8534340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1293649 
End bp1294287 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID646383577 
ProductSterol-binding domain protein 
Protein accessionYP_003263070 
Protein GI261855787 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.044865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGAA CCACACTGCC ATTGCCCCTC ATGCTGATGG TCGAAAAAAC CTTAAATCAG 
CGACTTAAGC AAGATACCTC CTCTTTGAAG CGTCTGCAAA AACTCAATGG ACTGGTTTTC
GAAGTGCTCT TGCGCGATCC TTCCTTAAGT TTCTTTATTA CTTCGACGCC CGAGGGCATT
TTGCTGCTCC GTCATCACGA AGCGTATGCC GACGCTCGCA TTCTAGCGAG TAGTTTTGGG
CTCTTACGCG CCGCTCGCAC TGAGCACAAA ATGGATGCCC TGTTCAATGG CGACATCCAG
ATCGAGGGAA ATCAGGAAGC CGCAGAATCA CTTTTGCGTA TTTTGGGCGC AATCGATTCC
GACCTGTTTG CGCGTCTGGC CGACAAAATT GGCGTGGCGC CGGCGGGATT CATTGAACGC
AAGATCGAGC GGTTCCGCGC TCAGGTAAAA ATCTGGCGGC AAACCCGACA ACTGGAAGCC
GCTGACTTCA TGGTTTTTGA GCGTGCCTTG TTGGTTGAGC CTGAATCAAT GCGCGGGCAG
CTTGATGATA TCGATTCTGT CCGGGATCGA GTGGATCGAC TGGCTGCGCG AATAGAGCGG
CTGGCGGTGC GCTTTGCAAA CGACCGGGGT GCTTCATGA
 
Protein sequence
MIGTTLPLPL MLMVEKTLNQ RLKQDTSSLK RLQKLNGLVF EVLLRDPSLS FFITSTPEGI 
LLLRHHEAYA DARILASSFG LLRAARTEHK MDALFNGDIQ IEGNQEAAES LLRILGAIDS
DLFARLADKI GVAPAGFIER KIERFRAQVK IWRQTRQLEA ADFMVFERAL LVEPESMRGQ
LDDIDSVRDR VDRLAARIER LAVRFANDRG AS