Gene Hneap_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1159 
Symbol 
ID8534311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1259693 
End bp1260949 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content54% 
IMG OID646383548 
Producttryptophan synthase subunit beta 
Protein accessionYP_003263042 
Protein GI261855759 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.445238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATAATC CCGAAAATCG AGAAATCAAC CCGACCATAA CGGCCTTTGA TGCAGCCACC 
TTCAATTTCG CACAATACCC GGACGAGCAC GGTCGTTTTG GCGAATTTGG CGGCAAGTAC
GTCGCGGAAA CGCTGATGGA CGCGATTCAG GAACTTCAGG ATGCGTATGC GACATTTCGC
AACGATCCCG AGTTCATTCG CGAATTTGAA ACCGACTTGA GAGATTACGT TGGTCGTCCT
TCGGCAATGT ATTACGCCGC ACGCATGAGT GAAGCCTACG GTGCACAAAT CTGGTTGAAA
CGAGAAGATT TGAATCACAC CGGTGCCCAC AAGATCAACA ACGCCATCGG TCAGGCGTTG
CTCGCCAAAC GCTTGGGCAA AACGCGCATC ATCGCAGAAA CCGGTGCCGG TCAGCATGGC
GTAGCCACTG CGACAGTAGC GGCACGCCTT GGCCTGGAGT GTGTGGTGTA TATGGGCGCA
GAAGACGTCG CCCGCCAGCA GCCCAACGTT TTTCGCATGA AATTACTCGG TGCGAAGGTC
GTTCCGGTTG AATCCGGCAC GCGTACACTT AAAGATGCGT TAAATGAAGC CATGCGTGAC
TGGGTCACCA ATGTCGATGA CACGTTCTAC ATCATCGGCA CCGTGGCAGG GCCGCATCCT
TACCCGCAGA TGGTTCGTGA TTTTCAGTCG ATTATTGGCA AAGAAGCACG TGCTCAGATG
CTTGAGAAAA CAGGTCGTTT GCCCGACGCC GTCGTTGCTT GTGTCGGCGG TGGCTCGAAC
GCCATTGGTA TCTTTCATGC CTTCCTGAAC GACAAGAATG TTGCCCTTTA TGGCGCAGAA
GCCGGTGGTG ATGGCGTAGA AACCGGCCGC CATGCAGCGC CACTGACAGC AGGGCGACCT
GGTGTATTGC ACGGTAACCG TACGTACCTG ATGGAAGACG AGAATGGTCA AATCATCGGC
ACACACTCCA TTTCTGCGGG CCTCGATTAT CCGGGCGTGG GACCGGAACA CAGCTGGCTC
AAAGATTTGG GTCGTGTGAC GTATGACGCG ATCACAGACG CCGAGGCCAT GAGCGCGTTC
CATGATGTCA TGCGTTACGA GGGAATCATT CCAGCCTTGG AATCGGCACA TGCCTTTGCT
TATGCCAAGA AACTTGCCCC CCAATACGGC AAGGACAAAA TCATTCTGGT AAACCTGTCC
GGTCGTGGCG ACAAAGACAT CAATACCGTG GCCAAGATGG AAGGGATTAA TCTATGA
 
Protein sequence
MDNPENREIN PTITAFDAAT FNFAQYPDEH GRFGEFGGKY VAETLMDAIQ ELQDAYATFR 
NDPEFIREFE TDLRDYVGRP SAMYYAARMS EAYGAQIWLK REDLNHTGAH KINNAIGQAL
LAKRLGKTRI IAETGAGQHG VATATVAARL GLECVVYMGA EDVARQQPNV FRMKLLGAKV
VPVESGTRTL KDALNEAMRD WVTNVDDTFY IIGTVAGPHP YPQMVRDFQS IIGKEARAQM
LEKTGRLPDA VVACVGGGSN AIGIFHAFLN DKNVALYGAE AGGDGVETGR HAAPLTAGRP
GVLHGNRTYL MEDENGQIIG THSISAGLDY PGVGPEHSWL KDLGRVTYDA ITDAEAMSAF
HDVMRYEGII PALESAHAFA YAKKLAPQYG KDKIILVNLS GRGDKDINTV AKMEGINL