Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1159 |
Symbol | |
ID | 8534311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1259693 |
End bp | 1260949 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646383548 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_003263042 |
Protein GI | 261855759 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.445238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATAATC CCGAAAATCG AGAAATCAAC CCGACCATAA CGGCCTTTGA TGCAGCCACC TTCAATTTCG CACAATACCC GGACGAGCAC GGTCGTTTTG GCGAATTTGG CGGCAAGTAC GTCGCGGAAA CGCTGATGGA CGCGATTCAG GAACTTCAGG ATGCGTATGC GACATTTCGC AACGATCCCG AGTTCATTCG CGAATTTGAA ACCGACTTGA GAGATTACGT TGGTCGTCCT TCGGCAATGT ATTACGCCGC ACGCATGAGT GAAGCCTACG GTGCACAAAT CTGGTTGAAA CGAGAAGATT TGAATCACAC CGGTGCCCAC AAGATCAACA ACGCCATCGG TCAGGCGTTG CTCGCCAAAC GCTTGGGCAA AACGCGCATC ATCGCAGAAA CCGGTGCCGG TCAGCATGGC GTAGCCACTG CGACAGTAGC GGCACGCCTT GGCCTGGAGT GTGTGGTGTA TATGGGCGCA GAAGACGTCG CCCGCCAGCA GCCCAACGTT TTTCGCATGA AATTACTCGG TGCGAAGGTC GTTCCGGTTG AATCCGGCAC GCGTACACTT AAAGATGCGT TAAATGAAGC CATGCGTGAC TGGGTCACCA ATGTCGATGA CACGTTCTAC ATCATCGGCA CCGTGGCAGG GCCGCATCCT TACCCGCAGA TGGTTCGTGA TTTTCAGTCG ATTATTGGCA AAGAAGCACG TGCTCAGATG CTTGAGAAAA CAGGTCGTTT GCCCGACGCC GTCGTTGCTT GTGTCGGCGG TGGCTCGAAC GCCATTGGTA TCTTTCATGC CTTCCTGAAC GACAAGAATG TTGCCCTTTA TGGCGCAGAA GCCGGTGGTG ATGGCGTAGA AACCGGCCGC CATGCAGCGC CACTGACAGC AGGGCGACCT GGTGTATTGC ACGGTAACCG TACGTACCTG ATGGAAGACG AGAATGGTCA AATCATCGGC ACACACTCCA TTTCTGCGGG CCTCGATTAT CCGGGCGTGG GACCGGAACA CAGCTGGCTC AAAGATTTGG GTCGTGTGAC GTATGACGCG ATCACAGACG CCGAGGCCAT GAGCGCGTTC CATGATGTCA TGCGTTACGA GGGAATCATT CCAGCCTTGG AATCGGCACA TGCCTTTGCT TATGCCAAGA AACTTGCCCC CCAATACGGC AAGGACAAAA TCATTCTGGT AAACCTGTCC GGTCGTGGCG ACAAAGACAT CAATACCGTG GCCAAGATGG AAGGGATTAA TCTATGA
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Protein sequence | MDNPENREIN PTITAFDAAT FNFAQYPDEH GRFGEFGGKY VAETLMDAIQ ELQDAYATFR NDPEFIREFE TDLRDYVGRP SAMYYAARMS EAYGAQIWLK REDLNHTGAH KINNAIGQAL LAKRLGKTRI IAETGAGQHG VATATVAARL GLECVVYMGA EDVARQQPNV FRMKLLGAKV VPVESGTRTL KDALNEAMRD WVTNVDDTFY IIGTVAGPHP YPQMVRDFQS IIGKEARAQM LEKTGRLPDA VVACVGGGSN AIGIFHAFLN DKNVALYGAE AGGDGVETGR HAAPLTAGRP GVLHGNRTYL MEDENGQIIG THSISAGLDY PGVGPEHSWL KDLGRVTYDA ITDAEAMSAF HDVMRYEGII PALESAHAFA YAKKLAPQYG KDKIILVNLS GRGDKDINTV AKMEGINL
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