Gene Hneap_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1124 
Symbol 
ID8534272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1223002 
End bp1224645 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content50% 
IMG OID646383509 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003263007 
Protein GI261855724 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00163985 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTA AAGCCAAGTT GATCATCTTG TCCGCATTCT CGATGCTTGT CATCGTGGTG 
CTTGGTGTTT TTGGGATGCT TAACGAAAAC AATGCACAAG ACCGTGCAGA GCAAAACTTC
AACTTACGAG TTCAACCGAT GATTGTTGCA AATCAATCGA TCCGAGAGAT CAACCTGATC
GTGATTCAGC TTCAAATGGC TTTGCAGCAT AATCCGAATT CAAGTAGCGT CTCCCTGCAC
GCTGACCATT CTATTGATCG CCACTTGAAC CCTATCGGTG AGGATTTGGC TGCGCTCAAA
AAACTCAATA CTAATTTATC TGGTGTGCGA CATCGGTCAG CGGAAGCAAA CCAAGTCCGT
TTGGGGCTGA TTTCCGCAGA AAACAAATTG GTAGAAGAAA CGATGTTGCC GATGATCGCA
TCCTTGAAAT CAGGTGACTT TGAGACGGCG AGATCGATAT TTATCTCTCA GCTTGTTCCT
AAAATGAATA CGTTCTCAAA AGCGGCTACA GCCTATCAAG ACCTGCTCAA CAATAATTTG
AAGAGCGAAA ATGACCGGAT GCGCCATGCC GTTGATCGGG ATAACTGGTT TTATGGCGGG
CTCATGGTGG TCTCGTTACT GCTGGTGATC GGGATTGCAT CTTGGGTCAT TCGCGAAATT
TCCAAGGGCT TGCGTGCGGC AGATCAGATG GCCATTTCAT TATCCAAAGG TGAATTGGAT
AGCTGCATAA ATATCACCTC GAAAGATGAA TTGGGCATGA TTTTGCGGCA TCTGGACAAA
GCGCGTGAAA ACTTGCGTGA AACCCTGAAA TCAATCGGTT CTGCTTCAGT CCAACTGGCG
GCGGCGGCGG AGGAAACCTC GGCTGTTTCG GCGCAAACCG ACCAAGGCGT TCGCCAGCAA
CAACAGGAAA CCGAAATGGT GGCTGCGGCC ATGAACGAGA TGAGCGCCAC TGTGCACGAT
ATCGCCCGCA ATGCGGCCGA TGCCTCGGCT GCGGCAAGTA AAGCCAATGA TGCGGCCACC
AGTGGTCAGG GTGTGGTGAA ACGTTCGGTG AAGATTATCA ATGATTTGGC CGCGAACGTT
GATCACGTGG CAGTCGCCAT TACCTCGCTT GAAGGCGAAT CGAAGGATAT TGGCAAGGTG
CTGGAAGTCA TCCGCGCGAT TGCCGAGCAG ACCAATTTGC TTGCCTTGAA TGCCGCCATC
GAAGCAGCAC GAGCAGGAGA ACATGGTCGT GGGTTTGCTG TTGTGGCAGA AGAGGTGCGC
TCTCTGGCTT CTCGAACACA AGGTTCTACT GAAGAAATTC GTCAGATGAT CGAACGCTTA
CAAACAGGTT CAGAGGCAGC GGTTTCGGCA ATGCATCAAG GCAAAGTTCA GGTAGAAGCC
AGCATCGGAG CCATGAAAGA GACCGAGCAT TCGCTGCAGG CCATCACGCA ATCGGTGCAA
ACCATCAACG ATCTGAACTT CCAGATTGCC AGTGCCGCTG AAGAACAAAG TGCGGTGACA
GAAGAGATGA ACCGGAACGT TCAGAAGATT TCTTCGATCA GCGAACAATC CGCCGAGGGT
GCGGGCCAGA CTCGGATTGC CTCCGAAGAA CTGGCGCGAC TGGCCGAAGG GCTGCAAGCG
AAGATCAATC AGTTCAGACT GTAA
 
Protein sequence
MTIKAKLIIL SAFSMLVIVV LGVFGMLNEN NAQDRAEQNF NLRVQPMIVA NQSIREINLI 
VIQLQMALQH NPNSSSVSLH ADHSIDRHLN PIGEDLAALK KLNTNLSGVR HRSAEANQVR
LGLISAENKL VEETMLPMIA SLKSGDFETA RSIFISQLVP KMNTFSKAAT AYQDLLNNNL
KSENDRMRHA VDRDNWFYGG LMVVSLLLVI GIASWVIREI SKGLRAADQM AISLSKGELD
SCINITSKDE LGMILRHLDK ARENLRETLK SIGSASVQLA AAAEETSAVS AQTDQGVRQQ
QQETEMVAAA MNEMSATVHD IARNAADASA AASKANDAAT SGQGVVKRSV KIINDLAANV
DHVAVAITSL EGESKDIGKV LEVIRAIAEQ TNLLALNAAI EAARAGEHGR GFAVVAEEVR
SLASRTQGST EEIRQMIERL QTGSEAAVSA MHQGKVQVEA SIGAMKETEH SLQAITQSVQ
TINDLNFQIA SAAEEQSAVT EEMNRNVQKI SSISEQSAEG AGQTRIASEE LARLAEGLQA
KINQFRL