Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1078 |
Symbol | |
ID | 8534225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1164824 |
End bp | 1166926 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646383462 |
Product | protein of unknown function DUF323 |
Protein accession | YP_003262961 |
Protein GI | 261855678 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTTTG TTTGCCCGCC CCAACTGGAT GGAACGGATG TAGAAGCCAA ACGTGAAGAA ATTCGTGCCT ACCTGCATGC GACCATGGAC ACCTTCGAAA GGCTGTTCTC TTTATTCGTC GACGACTCTG TGTTCTTTCA GCGACCGGAA CGTCTGCGTC ACCCGCATAT TTTCTATTTC GGTCATACGG CGGTCTTCTT CGTCAATAAG CTGATACTCG CCAAATTGCT TCCTGAACGG ATCAATCCCC GACTGGAATC GGTGTTCGCT GTTGGTGTGG ACGAGATGAG TTGGGATGAC CTGAACGACG CGCATTACGA CTGGCCGACC GTCGAGGAGA CCAGAGCCTA CCGCCAGCAA GTCCGAGCAA CGGTTGATCG GCTCATTCGG ACGCTGCCGC TCAGCCTGCC TATCGACTGG AATTCACCTT TCTGGCCGAT CTTGATGGGG ATTGAGCATG AGCGCATTCA TCTGGAAACA TCCTCTGTCC TGATTCGACA AACACCCATT GAATCCGTAA AACCTCAACC GTATCTCTGG CCGGTTTGCG AAGACGTGGG GCCGAACCAT TCAAACGAGC TGATTCCCGT TCCGGCCGGA AAGGTCGTCC TAGGGAAACA CGATCAGTTC TACGGATGGG ATAATGAATA TGGTCGCCAC GAAGCGCAAA TTCCCGCTTT TTCTGCCAGT CGCTTTTTGG TCAGCAATGG AGAGTTTCTT GAGTTTGTTC GGGATGGGGG TTATCACCAC GATTCTTATT GGGGTGAAGA AGGCTTGGCA TGGCGGCAAT TTCGGCAACC GGAACATCCC GTATTCTGGA TTGCAGATTC TGCTCAGCCA GATGGATTTC GCTACCGGAC ACTCGCAACA GAAATCCCAC TGCCCCTGAA TTGGCCGGTC GATGTCAATC AACTGGAAGC GGAAGCGTTC TGTAACTGGT TGTCGGCTAA AAGCGGTAAA ACAATTCGTC TTCCGTTTGA GGACGAATGG TATCGCCTTG TGGATGAAGC CGATCTCCTC GACCAGAGTG ACTGGGGCGG CATTCCGCCC GGCAACCTCG GGTTGGGTTA TGAGGCCAGC GCTTGCCCCG TGAATCGATT CAGACAAGGG GACTTTTACG ATATCGTTGG CAACGTCTGG CAGTGGACAA ACACACCGAT TTATCCCTTC GAAGGTTTCG AAGTTCATCC GCTTTATGAC GATTTCACCA CGCCCACATT CGACGGCAAG CACAATCTGA TCAAAGGCGG TTCGTTCATC AGCACAGGCA ACGAGGCACT CCAATCGGCT CGGTACGCCT TTAGACGGCA CTTCTTCCAG CATGCTGGCT TCCGTTATGT GCACAGCGAT TATGTCGAGC GCATCAACGC CAGTGTGTAC GAAACCGATT CACTGGTAAG TCAATACGCC GAATTCGGCT GGGGCCAGCG TTATTTTGAT GTTAATAACT TCCCTGCCGA ATGCGCTCAG CTTTGTCTTG AAGCGATGGT GGATATGCCC ACACGCCGTG CGCTGGATAT TGGTTGCGCG ACTGGTCGCA GCAGCTTTGA ACTGGCACGT GTCTTTGATG AGGTCACGGG TCTCGATTTC TCCGCCCGCT TCGTGCGCGT TGCCGAGCAG ATGAAAACCG AAGGTCGAAT TCGTTACACA TTACCCACCG AAGGCGAACT GGTCGATTTT CGCGAAGCAG CCCTGCCCGA CCACTTGTCG TCCACGCCCG GAAAAGTCAG CTTCTGGCAA GCCGATGCTT GCAACCTCAA ACCTCAATTC ACGGGTTATG ATCTGATATT TGCCGGTAAT TTGATTGATC GGTTGTACGA TCCGGCCAAA TTCCTGCGTG ATGCAGCGGA ACGATTGAAT CCGGGTGGCT TGCTCATCCT GACCTCACCT TACACATGGC TGGAAGAACA CACGCCCAAG ATGCAGTGGC TGGGTGGTAT TCGCCAAGAC GGCGAATCGA TCACCAGTTT CGAGGGGCTG ACGCAGCGAC TGCACACGCA GTTCAAGTTC ATTGCCCGGC ACGACGTTCC GTTCGTCATC CGAGAAACGG CACGCAAATT CCAGCACACC ATTGCGGAGA TGACGATCTG GAAAAAAGAA TGA
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Protein sequence | MPFVCPPQLD GTDVEAKREE IRAYLHATMD TFERLFSLFV DDSVFFQRPE RLRHPHIFYF GHTAVFFVNK LILAKLLPER INPRLESVFA VGVDEMSWDD LNDAHYDWPT VEETRAYRQQ VRATVDRLIR TLPLSLPIDW NSPFWPILMG IEHERIHLET SSVLIRQTPI ESVKPQPYLW PVCEDVGPNH SNELIPVPAG KVVLGKHDQF YGWDNEYGRH EAQIPAFSAS RFLVSNGEFL EFVRDGGYHH DSYWGEEGLA WRQFRQPEHP VFWIADSAQP DGFRYRTLAT EIPLPLNWPV DVNQLEAEAF CNWLSAKSGK TIRLPFEDEW YRLVDEADLL DQSDWGGIPP GNLGLGYEAS ACPVNRFRQG DFYDIVGNVW QWTNTPIYPF EGFEVHPLYD DFTTPTFDGK HNLIKGGSFI STGNEALQSA RYAFRRHFFQ HAGFRYVHSD YVERINASVY ETDSLVSQYA EFGWGQRYFD VNNFPAECAQ LCLEAMVDMP TRRALDIGCA TGRSSFELAR VFDEVTGLDF SARFVRVAEQ MKTEGRIRYT LPTEGELVDF REAALPDHLS STPGKVSFWQ ADACNLKPQF TGYDLIFAGN LIDRLYDPAK FLRDAAERLN PGGLLILTSP YTWLEEHTPK MQWLGGIRQD GESITSFEGL TQRLHTQFKF IARHDVPFVI RETARKFQHT IAEMTIWKKE
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