| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1043 |
|---|
| Symbol | |
|---|
| ID | 8534190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 1127935 |
|---|
| End bp | 1129200 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646383427 |
|---|
| Product | glutamyl-tRNA reductase |
|---|
| Protein accession | YP_003262926 |
|---|
| Protein GI | 261855643 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0373] Glutamyl-tRNA reductase |
|---|
| TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTCA TTGCGTTTGG ATTGAATCAT AAAACGGCCC CGGTGGATGT GCGCGAGCGC
ATCGCCTTCG GGCCGGAGCG CATGTCGTCT GCGCTTGAGG GGCTGATTCA TGGTTGTGGG
GCGAAAGAAG CGGCCATCGT TTCTACCTGC AATCGAACGG AAATTTATAC CCGTTCGGAA
TGTGTGCGTG AGAATCTGGT GGAATGGCTG GCTGCGTTTC ACAAGTTGCC GCCGGAAGCC
ATCGCCCCGT ACGTGTACGA CCATCGAGAT GAACTGGCCA TTCGACACCT GATGCGCGTT
GCCTGCGGTT TGGACTCCAT GGTCCTGGGC GAGCCGCAAA TTCTTGGCCA GATCAAGGAT
GCCTTCACCA TCGCACAAGA CGCTCAGGCA TTGGGGCCTG TTTTGAGTCG GTTATTCCAG
CACACGTTCT CGGTGGCAAA GCAGGTCCGT ACAGATACAC AGATTGGCGC CAGCCCAGTG
TCCGTGGCAT TTGCAGCCGT GAGTCTCGCC AAGCAGATTT TCGGTGATCT ATCCCAAAAG
ACTGCCTTGT TGATCGGCGC AGGCGAAACA ATCGAACTGT GCGCCCGTCA CCTTCAGGGC
AGTGGGCTCA AGCAGGTCAT TGTGGCCAAC CGGTCGATCG ACCGGGCCCA CCACCTCGCC
GAACAGTTTG GCGGGCTCGC CATTGGTCTT ACCGACATTC CTGCTCATTT GCACAAGGCC
GATGTGGTTA TTTCCTCAAC CGCCAGCCCA CTACCTGTGT TGGGTAAAGG GGCGGTAGAA
CAGGCACTCA AGCAGCGTAA GCGCCGCCCG ATTTTTATGG TGGATATTGC TGTTCCTCGT
GATATCGAAC CGCAAGTGAG CGATTTGCAG GATGTGTACC TGTATACCGT TGATGATCTA
AAAACTGTCA TCGATGAGGG TCAAAAATCC CGTGCCGCCG CAGCAGAGCA GGCGGAAGAA
ATCATCAGCC TGCAAGTTGG TCATTTCCTC GAATGGGTGC AATTGCAGAC GGGCGCGGAA
CTGATCAAGT CCTATCGACG CCAATCAGAG CAAAGCCGGG ATGATGTGTT GTTCAGGGCA
AAGGCATTGC TTGCGGCGGG TAAATCTCCC GAGGAAACCT TGGATTACCT TGCGCACACC
CTGACCAATC GGCTCATTCA TCACCCCACC GTCGTGCTGC GTGAAGCCTG TGCTACGGGT
GATTTAACCG CCGTTCATGC GGTTCAGAAC GTACTCGGTC TGGGTGGCGA TTCCCCGTCG
TCTTAG
|
|---|
| Protein sequence | MSLIAFGLNH KTAPVDVRER IAFGPERMSS ALEGLIHGCG AKEAAIVSTC NRTEIYTRSE
CVRENLVEWL AAFHKLPPEA IAPYVYDHRD ELAIRHLMRV ACGLDSMVLG EPQILGQIKD
AFTIAQDAQA LGPVLSRLFQ HTFSVAKQVR TDTQIGASPV SVAFAAVSLA KQIFGDLSQK
TALLIGAGET IELCARHLQG SGLKQVIVAN RSIDRAHHLA EQFGGLAIGL TDIPAHLHKA
DVVISSTASP LPVLGKGAVE QALKQRKRRP IFMVDIAVPR DIEPQVSDLQ DVYLYTVDDL
KTVIDEGQKS RAAAAEQAEE IISLQVGHFL EWVQLQTGAE LIKSYRRQSE QSRDDVLFRA
KALLAAGKSP EETLDYLAHT LTNRLIHHPT VVLREACATG DLTAVHAVQN VLGLGGDSPS
S
|
|---|
| |