| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1020 |
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| Symbol | |
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| ID | 8534167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1103883 |
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| End bp | 1105196 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646383404 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003262903 |
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| Protein GI | 261855620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGC GCCCCCGACT CAAACCGCAT GCAGAGGCCA CCCGTTGCGC CATATCTGGA
AACAAGAGCC GTCTCCTAAC CATCCTCGCC GTACTGTCCG TTCTGGCCTT GGGCGGCTGC
CAGAATCAGA CAGCCACGGA TAAATCGGCC GAGAAGGAAA AAGCCAAAAC GGAGAAACCC
GCATCAAGAA TGCCGGGGAT GATGTTAACG AAAGTGTCGG TCATCACGCC CAGCGTACGA
ACGGTGCCCA TCACCATGAC CGCAGCGGGC ACGCTGGCCA GCCCGAACGC CGTCACACTG
ACGCCGCAGG TCAGCGGCAC CATTGATGCC GTGCACGTGC AATCCGGTCA GCAGGTCGAG
AAGGGCGAAC TGCTCTTCTC GCTCGATGCA CAACCCTTCG AAACGGCGCT GCTTTCTGCT
CGGGCCAAAC TCGAAGGTGA CCGCGCACAG GCGCGCTATG CTGCGCAACA GGTAAAGCAA
CTCAAGCCCT TGGTTGAAAA AGAGTACATC ACCCGTCAAT CCTACGATCA GGCCGTCGCT
ACAGCCATGG CCGCCAACGC GCTGATTGCT CAGGATCAGG CCGCCATTCA GACGGCGCAA
ATTAATCTTG CCTACACCAA GATCCGGGCG CCGATTACCG GACGACTGGG GGAAATTTCG
CTCCAGCCCG GCAACCTTGT GGTCGCCAAC AACACGGCAT TGTCTACCCT CGTTTCCAAT
CGTGAACTGC TGGTGAATTT CAGCCTGCCG CAATCGGTCT TGAATGCGCT CAGCAAGGAA
TGGCCGGGGC TGGGGCAAAC CAAGCCGGGA GAAAAGAGCG TTCCGCCGCC CACCGTTGAG
GTTCTGGATG AACACGCCGA GCACATACTC GGCAAAGGGC ATTTAAGCTT CATCGACAAC
AGCATCAGCG CCGGCACCGG CACCATCCGC CTGCAGGGGT TGATCGACAA CCACGACGGT
TCGCTCTGGC CCGGCCAGTT TGTAACGGCA CGCCTCACCT TGGGTCAAAT TCCCAATGCG
CAGGTTTTGC CCGCTGCTGC CGTACAAATT GGCGACCAAG GCATGTTTGT CTATCTGTAC
AAAGACGGTA AAGTCGAAAT GCAGACAGTT TCCCCCGCCC GAAACACAAC GAAAGAATCC
GCCTTGCCCG CAGGCAGCCT GCCTGCCGAT GCAAAAGTCA TCTATCCCCT ACCCGCCCGA
ATCGCACCAG GCATGCCGGT CGCGCTTGAA AAGACGAGTA ACCAGAAAGG CCAGAGTTCT
GAGCAGCTAA AAGCGGAATC TGCAGCGCAC TCAGGTAGTT CACGCAATGA ATAA
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| Protein sequence | MNMRPRLKPH AEATRCAISG NKSRLLTILA VLSVLALGGC QNQTATDKSA EKEKAKTEKP
ASRMPGMMLT KVSVITPSVR TVPITMTAAG TLASPNAVTL TPQVSGTIDA VHVQSGQQVE
KGELLFSLDA QPFETALLSA RAKLEGDRAQ ARYAAQQVKQ LKPLVEKEYI TRQSYDQAVA
TAMAANALIA QDQAAIQTAQ INLAYTKIRA PITGRLGEIS LQPGNLVVAN NTALSTLVSN
RELLVNFSLP QSVLNALSKE WPGLGQTKPG EKSVPPPTVE VLDEHAEHIL GKGHLSFIDN
SISAGTGTIR LQGLIDNHDG SLWPGQFVTA RLTLGQIPNA QVLPAAAVQI GDQGMFVYLY
KDGKVEMQTV SPARNTTKES ALPAGSLPAD AKVIYPLPAR IAPGMPVALE KTSNQKGQSS
EQLKAESAAH SGSSRNE
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