| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1019 |
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| Symbol | |
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| ID | 8534166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1100714 |
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| End bp | 1103890 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646383403 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_003262902 |
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| Protein GI | 261855619 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACG CGATCAGCAA CTTGGCCGCG CCGTTCATTC GGCGCCCGGT CATGACGACC
GTGCTCTTTG CCGCGTTGAT TCTATTTGGC GTATTTGCCT GGCGAGCATT GCCGGTTGCC
ATGTTGCCGA ATGTCGCGTT CCCGACGGTC TCCGTTTCCG CCAGCCTGCC CGGAGCCAGT
GCCGAACTCA TGGCCAGTGC CGTCGCCTCG CCGATGGAAC AGGCGTTTTC GGGGATTCCT
GGTCTGCTTT CCGTCAACTC GGTCAACAGC ACGGGCACGA CCCGCATCAC CTTACAATTC
GATTTAAGTC GCGATATCAA TGCCGCCACA CAGGATACGC AAGCCGCCGT CACACAGGCC
GCGCGCTTCT TCCCCAGCAC GATGACGCAG CAGCCGACCG TGCGGCAACA AAATCCGACC
AGTAGCCCTA TCGTCTTTAT CGGTTTGTCT GCCCCCGACA TGCCGCTGTA CCAACTCGAT
GCCTTTGCCG AACAACAACT CGCGGTGAAG TTGCAGTCCA TTCCGGGTGT TTCGGAAGTG
CGTGTCTTTG GGGGGCAAAC CTACGCTGTA CGGCTTCTCC TGAACCCATA TGCCATGCAG
GCGCGCAATC TTTCCCTGAC CAATCTGGTC AATGCGATCG ACAGCAATAA TGCAAATCTG
CCGCAGGGCA CTCTGCAAAG CCCGAGCCGC TCTTATAACC TCAAGGTCGA TGGCCAACTG
ACCAACGCGA CGCAATTCAA CAAACTCATC GTAGCCTACA ACAATGGCGC ACCGGTCGAG
CTCAACCAGA TGGGCCACGC GGTGGATGGC GTGCAGCAGA ACACGCGCGC CACCTGGATC
AACAATGAGC GCGGCATCAT TCTCGCCATC GTTCGTCAGC CCGACAGCAA TACGGTCGAT
ATCGCAAAGG CAATCCGCGC CGCACTACCC AAGCTCAACG CGTCGCTTCC GGGCGGTGCC
AAGATGCAGA TCATCTACGA CAAATCTACC TACGTTCAGG CGGCTGTCGA TGAGGTTGAA
TTCACGTTGG TTCTGGCAAG CCTGCTGGTT GCTGCCGTGA TCTGGCTCTT CCTTGGTCAA
TGGCGACAAA CAATCATCGC GGTAATTTCC ATTCCGATCT CGATTCTCGG CACGTTTGCC
GTCATGCATC TGCTCGGCTA CAGCCTGAAC ATACTGACGC TGTTGGCGCT GACACTGGCG
GTCGGTTTTG TTGTGGATGA CGCCGTCGTC ATGCTCGAAA ACATTTCCCG ACACCGCGAA
ATGGGCAAAA GCCCGATGCA GGCCGCTTTG ATCGGCAGCC GGGAAATCGG ATTCACGATT
CTATCGATGA CGCTCTCGCT GGCCGCCGTG TTCCTGCCGT TGATCCTGAT GGGCGGCCTG
CTCGGAAGAT TATTCCTCGA ATTTGGAGCC ACGATCGGCA TCGTGATTCT CATGTCAGGG
CTGGTGGCAC TCTCGCTCAC GCCCATGTTG CTGGCCCGAA TGCGAGAGCA AAAACAAACC
GACGCAACCC TTAACCCACC AAAACCCGGA CTGTTTGGCC GCGGTTTCAA TGCGCTCACG
CGGGGTTATA TCCGTTCGTT GCGCTGGTCG CTGAAGTTTC GCTGGTTGAT TCTGCTCGCG
GCGGCCGGTT CGCTTGTTGG TGCCGTCTTT TTCTTTCAGC ATCTTGAAAA GGCGTTCATA
CCGAATTCGG ATACCGGCAT GGTAATGGGC ATGTTGAGCT ATCCGGAGGG AATAAGCTTC
GATCAACTCA AAGATCAGCA ACAGATTATT TCCAAGGCAT TGCAAAAAAA CCCCGCTGTG
TTGACCGTCA TGTCGAATGC CGGGCAAGGT GGCGCGGGCG GTGGTGGCAG CAATGTCGGC
TTCATGATGA TCCAGCTCAA ACCGGCGAAC GAACGCGCGC CATTGAACTC GGTTATTCAG
GACTTCCGCA AAACCATGGC GAAACTTTCC GATCGTTTAG GATCGACGCG CGCCTTCTTC
ATTGAGCCCC CCGCCATTCG AATCGGTGCG CTCTCCTCGA ATTCGAATTA TCAGTTTGTT
CTTCAATCCA CGAATCAGGA TCAGCTCAAC CAGGCCGCGC AAGCATTCCT ACCCTTTCTG
CGTGCCGTTC CCGGCGTGAC GAGTGTCGAT TCCAGCCTGC AAATCCGTAA TCCGCAGATC
AACGTCGATA TCCTGCGTGA ACGGGCAGCC TCTCTTGGCG TCACCCCAAG CGCGCTCGAA
CAGACACTGA ATCTGGCCTT CGGCGGCACT CAGGTCAGTA CGATTTATGG CGCGAGCGAC
CAGTATCAGG TCATCGCTGA ATTGGCGCCG CAGTACCAGA ATGACATCTC CGCGCTGGAC
GCCATCAGCG TGCCCGGCAG CAATAACACG CTAGTCCCCT TGAGCGCGGT GGCACGCTTT
TCTACCGGTG TCGGGCCGCT GTCCATCACC CATTACGGTC AACTGCCGTC GATCACCCTG
TCGTTCGATC TCAAACCCGG CTATTCGCTC GATCAGGTCA GTCGAGCCAT TGAAGAAGCC
GCATTGGAAC ATTTGCCACA GAATGTCAGC GGCCAGTTCG CCGGTTCCGC ACAGGCATTC
CAGGATTCAC TCAAGACGCT ACCGTTACTG CTCGGTGCCA CCATACTCGT GATCTACGTG
ATTCTGGCAA TCCTGTACGA ACACTTCATT CACCCGCTCA CCATCCTCAC CGCCCTGCCC
CTCGCCGGAT TCGGTGCGCT GGCTTCGCTG TACCTGTTCA ACCAGCCGCT CGATGTATTC
AGCTTTGTCG GCATCATCAT GCTGGTAGGG TTGGTGAAGA AGAACGGCAT CATCATGCTG
GATTTCGCCA TTCATCGACG ACGAGAAGGC GAAAGCGCGA TTGATGCGAT GGTCGATGCC
TGTACCGTGC GTTTCCGGCC GATCATGATG ACCACGCTCG CCGCCATTTT GGGCACCCTG
CCCATTGCCG TCGGTTTCGG GGCGCAAGCA GAAGCCCATC AGGCGCTGGG GATTGCCGTT
GTCGGTGGTT TGGTGTTTTC CCAGCTATTA ACACTGTACG TCACTCCGGC GTTCTACGTG
GTGGCCGAAG GGCTAACTGG ACGCAAAAAG AAGAGGGCCA TGGATGAATC GACCGTGGCC
GATCAGGCCC AGCCTAATCA GGCACGGACT AATCAGGCCC TGACTGATCA GAAATAA
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| Protein sequence | MNNAISNLAA PFIRRPVMTT VLFAALILFG VFAWRALPVA MLPNVAFPTV SVSASLPGAS
AELMASAVAS PMEQAFSGIP GLLSVNSVNS TGTTRITLQF DLSRDINAAT QDTQAAVTQA
ARFFPSTMTQ QPTVRQQNPT SSPIVFIGLS APDMPLYQLD AFAEQQLAVK LQSIPGVSEV
RVFGGQTYAV RLLLNPYAMQ ARNLSLTNLV NAIDSNNANL PQGTLQSPSR SYNLKVDGQL
TNATQFNKLI VAYNNGAPVE LNQMGHAVDG VQQNTRATWI NNERGIILAI VRQPDSNTVD
IAKAIRAALP KLNASLPGGA KMQIIYDKST YVQAAVDEVE FTLVLASLLV AAVIWLFLGQ
WRQTIIAVIS IPISILGTFA VMHLLGYSLN ILTLLALTLA VGFVVDDAVV MLENISRHRE
MGKSPMQAAL IGSREIGFTI LSMTLSLAAV FLPLILMGGL LGRLFLEFGA TIGIVILMSG
LVALSLTPML LARMREQKQT DATLNPPKPG LFGRGFNALT RGYIRSLRWS LKFRWLILLA
AAGSLVGAVF FFQHLEKAFI PNSDTGMVMG MLSYPEGISF DQLKDQQQII SKALQKNPAV
LTVMSNAGQG GAGGGGSNVG FMMIQLKPAN ERAPLNSVIQ DFRKTMAKLS DRLGSTRAFF
IEPPAIRIGA LSSNSNYQFV LQSTNQDQLN QAAQAFLPFL RAVPGVTSVD SSLQIRNPQI
NVDILRERAA SLGVTPSALE QTLNLAFGGT QVSTIYGASD QYQVIAELAP QYQNDISALD
AISVPGSNNT LVPLSAVARF STGVGPLSIT HYGQLPSITL SFDLKPGYSL DQVSRAIEEA
ALEHLPQNVS GQFAGSAQAF QDSLKTLPLL LGATILVIYV ILAILYEHFI HPLTILTALP
LAGFGALASL YLFNQPLDVF SFVGIIMLVG LVKKNGIIML DFAIHRRREG ESAIDAMVDA
CTVRFRPIMM TTLAAILGTL PIAVGFGAQA EAHQALGIAV VGGLVFSQLL TLYVTPAFYV
VAEGLTGRKK KRAMDESTVA DQAQPNQART NQALTDQK
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