Gene Hneap_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0993 
Symbol 
ID8534136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1067123 
End bp1069408 
Gene Length2286 bp 
Protein Length761 aa 
Translation table11 
GC content56% 
IMG OID646383373 
ProductPTSINtr with GAF domain, PtsP 
Protein accessionYP_003262876 
Protein GI261855593 
COG category[T] Signal transduction mechanisms 
COG ID[COG3605] Signal transduction protein containing GAF and PtsI domains 
TIGRFAM ID[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGATG AATTACGTCG AATAGTCACC GAGGTCGCCC AATCAGCAGA CTTGCGTACG 
GCGCTTGATT TGATTGCCCG ACGAGTGCGT GATGCTCTGA AGGTTGATGT TTGCTCTGTA
TATGTGCTGA CGCGTCCTGT ACCGCCTCAG GAAGCGGGAT TGCTGTTGCA AGCAACAGAG
GGTTTGAACC AGAACATGAT CGGCCGAGTC ACGCTTGCCC TGAATGAGGG GCTGGTGGGG
TTGGTTGCTC GTCGAGCAGA ACTGGTCAAT CTGGAAAATG CACCCGATCA CCCTGCATTC
AAGTTCGTCT CGGATATTGG TGAGGAGTTT TACCACGGCT TTCTTGGCGT GCCGATCATT
TACCGGGGCG ACGTGCTGGG TGTGCTCGTG GTGCAATCGC TTGAGCGCCG GAAATTTTCG
GCGGATCAAG AATCGTTTCT TGTTACGCTG GCTTCTCAAT TGGCTTCAGG CATCAGACAG
GCTCAAGTCA GTGGCGAGTT GTCACAGCAT GAAACCCCGG CGTCCGATAT CGGGGCCGCT
GTAATTGCTC GAGGCCTGCC GGGCTCGCCC GGGGTTGTCT TTGGTACGGC CGTCAGCGTA
CTTAATTCCG TTGATCTCGA AAGCGTTGCC GATCGAGTGG TCGAAGACCC AGCGAATGAA
TGGCAAGTTT TGCTCTCTGC CATTGAAGCC GTTCGCGCCG AGTTCGCCCA ACTCAAGGAT
GATTTTGCGC GTGCGGCTTG TAACGCGGAT GAAAATATCC TCTTTGATGC CTTCATCATG
ATGCTGGGCA GCGGCTCGTT CATCGGCAGC ATGGAGTCTC GCGTGCATGC GGGTATGTCG
GCCTCGGCGG CGCTCAGAGA CACGGTGCGC GAGCACGCCG CAGTTTTTGA AAATATGAGT
GATGCATACC TGCGCGAGCG CGCTCAGGAT GTGCGCGATC TGGGCACCCG TATTTTGGTG
AAGCTACGTG CACGCACACA CGACGCACGC GATCTACCCG AACGCATCGT CCTGATCGGG
CGCGATCTTT CTGCCTCCCA TCTGGCCGAA ATCCCAACCA ATCGGTTGGT GGGGATTGTA
TCCAGCAGTG GTACAGGTTC ATCGCATCTG GCTATTCTGG CGCGTGCTTT GGGTATTCCG
GCGGCGATGG GCGTATCCGA CTTGCCCATC GTGTCGCTGA ATGACCAGGA GGTCGTTGTT
GACGGCTACC GGGGGTTGTT AATCGTTCGT CCGGTCGGCT CGTTCCGGCA GGAACTCTCT
CGCCTCGTGC AGGAAGAGGC GCAACTTACG GCCGGCCTCA AGGCGCTTTG TGATCTGCCA
GCCCAGTCTC TTGATGGTCG TCGCATAGGG ATGTACGTCA ACATCGGTCT GCTGGCCGAT
ATGGCTCCGT CGATGACGGT GGGTGCTGAA GGTATCGGTC TGTATCGGAC TGAAATTCCC
TTTCAAATCC GCAAACAGTT TCCGGGCGAA GAGGATCAAG CGGCCATCTA CCGGGAGGCG
CTCGAAACTT TTCGCGGTAA GGAAGTCGTC CTGCGGACGC TGGATGTCGG CGGGGACAAA
CCCCTTTCCT ATTTCCCGAT CAAAGAAGAT AACCCTTTCC TCGGCTGGCG CGGCATTCGT
CTGGTGCTGG ATCATCCGGA AATTTTCCTC ACGCAAATTC GAGCCATGCT GCGTGCCTCC
ATCGGCTTGG ATAATCTCAG CATCCTTCTG CCCATGATTG GCTCCGTCGA AGAGTTGGAA
ACGGCCAAAG AGTACATCTT CCAAGCGCTG AACGAATTGA GGGAAGAGGG GCAAGCTATT
TCCACGCCGC GTATCGGCGT CATGATCGAA GTGCCATCAG CGGTGTACCA GATCGAAATC
ATTGCAGCCA TGGTGGATTT TCTATCCATC GGTACCAATG ATCTGACGCA GTACATTCTC
GCGATTGACC GGAATAATGA GCGCGTGGCT GCTCGCTATG ATGCATTGCA CCCGGCGGTA
TTGCGCGCCA TTGTCGAAGT CGTTGATGCA TCACACCTGC TGGGGCGCGA GGTTACCGTT
TGCGGTGAAC TGGCAGGAGA CCCGATGGGC GCGGTTCTGC TTCTGGGGAT GGGTATCGAC
GTGCTCTCGA TGAGTGCGGG GTCATTGCCT CGGATTAAAT GGGTGATTCA AAGCTTCAAG
CAGAGTGATG CACGGCAGTT GCTCACTGCC GCCCTTGAGT GCAGTCGGCC AACTCAAATC
CGAGCCATGC TCTCCCAAGC GCTTGAAGAG CGGGGATTGG GTGGCCTGAT TCGAGCCGGT
TCCTGA
 
Protein sequence
MLDELRRIVT EVAQSADLRT ALDLIARRVR DALKVDVCSV YVLTRPVPPQ EAGLLLQATE 
GLNQNMIGRV TLALNEGLVG LVARRAELVN LENAPDHPAF KFVSDIGEEF YHGFLGVPII
YRGDVLGVLV VQSLERRKFS ADQESFLVTL ASQLASGIRQ AQVSGELSQH ETPASDIGAA
VIARGLPGSP GVVFGTAVSV LNSVDLESVA DRVVEDPANE WQVLLSAIEA VRAEFAQLKD
DFARAACNAD ENILFDAFIM MLGSGSFIGS MESRVHAGMS ASAALRDTVR EHAAVFENMS
DAYLRERAQD VRDLGTRILV KLRARTHDAR DLPERIVLIG RDLSASHLAE IPTNRLVGIV
SSSGTGSSHL AILARALGIP AAMGVSDLPI VSLNDQEVVV DGYRGLLIVR PVGSFRQELS
RLVQEEAQLT AGLKALCDLP AQSLDGRRIG MYVNIGLLAD MAPSMTVGAE GIGLYRTEIP
FQIRKQFPGE EDQAAIYREA LETFRGKEVV LRTLDVGGDK PLSYFPIKED NPFLGWRGIR
LVLDHPEIFL TQIRAMLRAS IGLDNLSILL PMIGSVEELE TAKEYIFQAL NELREEGQAI
STPRIGVMIE VPSAVYQIEI IAAMVDFLSI GTNDLTQYIL AIDRNNERVA ARYDALHPAV
LRAIVEVVDA SHLLGREVTV CGELAGDPMG AVLLLGMGID VLSMSAGSLP RIKWVIQSFK
QSDARQLLTA ALECSRPTQI RAMLSQALEE RGLGGLIRAG S