| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0977 |
|---|
| Symbol | |
|---|
| ID | 8534120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1051973 |
|---|
| End bp | 1052752 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646383357 |
|---|
| Product | protein of unknown function DUF45 |
|---|
| Protein accession | YP_003262860 |
|---|
| Protein GI | 261855577 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGTC TCGGTCGATG GCGTCCGCCG AGCGTGCAGA CGCAGCCCAA GGTGGTCATC
ACCCACGAAC TCCTGCCTGA TACAGGCATT GAGTTCAAGC TTACTCGCAA GACGATCAAG
GGCGTGTATC TGCGAATCGG GCGCGCGGAT GCACAGTTAC AGGTTAGCGC ACCCCACCAT
ATCGCCTTAC CACTGATCCA CCAGATTCTA CTGAAAAAGC AGGACTGGAT TCTCCAAAAA
CAAAGCCAGA TCAAATCGCA AAGAAGCCTT CAAAACCGTT CTGATGCGAT TTCAGACGGT
TCAACCACCC TTCTGTTCGA TCAGAATCAC CGCATCAGTG TCCACACCAA TTCCCAACAA
AATTTAACGC TGATCGACAA TGGAACGATA CAGGTATTTA CGCGGACAAA TGCCTTGAGT
GAAACCCAAC TGCATGAGGC GATCACCCAA CAGTTAAGGG CCACACTTCA GGACTATCTC
ACGACTCGTC TGCCGTATTG GTGCGAAAAA ATCGGCGTCG ATATCAACTT CATCGGAATC
AAACGAATGA AGACGCGCTG GGGCAGTTGC AATATTCGTG ACAGGCGAAT CTGGCTGAAT
CTCGAGCTAA TACATATGCC CAAAGGTTGC ATCGATATGG TTCTGGTTCA CGAACTCGTT
CATCTCCACG AACGCAATCA TAACGCTCGG TTTTATGCCC TTATGGACCA ATTCATGCCG
GATTGGCAAA GATGGCATAC CCATCTGAAA CGTAAAGGTA TTTCCGCCGA AAGAAACTGA
|
|---|
| Protein sequence | MFGLGRWRPP SVQTQPKVVI THELLPDTGI EFKLTRKTIK GVYLRIGRAD AQLQVSAPHH
IALPLIHQIL LKKQDWILQK QSQIKSQRSL QNRSDAISDG STTLLFDQNH RISVHTNSQQ
NLTLIDNGTI QVFTRTNALS ETQLHEAITQ QLRATLQDYL TTRLPYWCEK IGVDINFIGI
KRMKTRWGSC NIRDRRIWLN LELIHMPKGC IDMVLVHELV HLHERNHNAR FYALMDQFMP
DWQRWHTHLK RKGISAERN
|
|---|
| |