Gene Hneap_0965 details

Gene Information

• Locus tag: Hneap_0965
• ID: 8534107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 1040904
• End bp: 1041470
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646383346
• Product: Acyl-homoserine-lactone synthase
• Protein accession: YP_003262850
• Protein GI: 261855567
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism; [T] Signal transduction mechanisms
• COG ID: [COG3916] N-acyl-L-homoserine lactone synthetase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.397594
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGATTG AATATGGAAG TAAAACCAGT CTCCCTTTTG GTTTGTTTGA AGATTTAAGC 
TATTATCGTA ATGATGTTTT TGTCAGGCTT CTTGGTTGGG ATTTGGACAC CCCATATGGT 
GTGGAACTTG ATCAGTTTGA CCGGCCAGAT ACAGTTTATG TTGTTGCGAA GAATGATGAG 
GGCAGGATCA ATGGGTGTGC TCGTCTATTG CCTACAACTT CACCATACCT GCTTGGTGAG 
GTGTTTCCTG AACTTTTAAA CGGGCTATGC CCACCTTCTT CTCCAGACGT GTGGGAGCTT 
TCGCGCTTTG CGGCTGTAGA CGTATCTGCT GAACCTACGT CAGCTAGGGG GCAGCTTTCC 
TCGCCAATTG CCATTACTTT ACTTAGAAGC TCGTTGCAGA CGGCAGCAAC TTTGGGTGCT 
AAATCTGTGA TAACTGTCTC GCCCATCGGG ATTGAACGAC TTCTTCGTCA TGCCGGATTC 
CAAGCTCACC GTGCAGGTCC CCCTATGGTT GTGGGTGGCC ACCCCATTTT TGCTTGCTGG 
ATTGATATCG CGCCCTCTCT CACTTAA 

 

Protein sequence

MRIEYGSKTS LPFGLFEDLS YYRNDVFVRL LGWDLDTPYG VELDQFDRPD TVYVVAKNDE 
GRINGCARLL PTTSPYLLGE VFPELLNGLC PPSSPDVWEL SRFAAVDVSA EPTSARGQLS 
SPIAITLLRS SLQTAATLGA KSVITVSPIG IERLLRHAGF QAHRAGPPMV VGGHPIFACW 
IDIAPSLT