| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0924 |
|---|
| Symbol | |
|---|
| ID | 8534065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 992209 |
|---|
| End bp | 994716 |
|---|
| Gene Length | 2508 bp |
|---|
| Protein Length | 835 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 646383308 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_003262813 |
|---|
| Protein GI | 261855530 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA TTGATCTTTA CATCCGTATT GATGGTATGA CGTGCGCATC TTGCAGCGCG
CGCGTCGAGC GTGGTCTTGC CAAACTTCCC GGTGTGGCTG CCGCCAGTGT GAATCTCGCA
ACCGAACAGG CAACGATCCA GTTCGACCCG CAACAGATCC GTACCACCGA CTTGATTGAA
GTCATCAGGG ATGTCGGCTA TGCACCGGTT GTCGCCGAGA TAGATCTCGC AATCGAAGGG
ATGACGTGCG CATCATGCGT CGGGCGCGTT GAGCGTGCAT TGAAACGTTT GCCCGCTGTA
GTGGATGCCG TGGTGAATCT GGCGACCGAA CGTGCTCATG TTCGCTATAT CCCGGCGATG
ATTGAGCCGA ATGAGTTGAT TGCCGCGGTG ACGGAAGCGG GTTATGGCGC CAGCCTTGTC
GATGGTTTTG CTGATGGCCA TTCCGATGGT GTGAAGTCGG ATGATAACCG TCAGCAGGAG
AGCCTCTCCG CCATGAAGCG TGACGTGATT CTAGCTGCCG GTTTCTCTCT GGGTATTATG
TTCTTATCCA TGGGCGCCAT GTTCATCCCC GAGTTCGAGC GCGTGATGGA TGGAATCAGT
CCCTTCCCGA ATTTTTGGGA TTGGGTCCAA CTGTCCCTTG CCTCGGTTGT ATTGTTCGGC
CCCGGTCGCC GTTTTTTCAA ACCGGGCTTT ATCGCCTATC GTCACCTCTC GCCGGATATG
AACTCACTGG TCGCGACCGG CACAGGAGCG GCTTACGCTT ACAGTGTGTT GGTGCTGGTT
TTCCCCTTCT TGTTTCCGGT CGAGGCCAGG CATGTCTATT TTGATTCGTC CGCTGTCGTT
ATTGCGGCCG TATTGGCTGG CAAATATCTG GAAGCACTCG CCAAGGGCAG AACGTCCGCT
GCGATTCGAA AACTGATTGA TTTACAGGCG AAAACGGCGC ATATCCTTGA TGAATCCGGT
GTTGAACGAG ATGTGCCCTT GGCGCAACTG CATAAAGGTG ATCGATTTGT CGTGCGCCCC
GGCGAGCGTA TTCCGACGGA TGGGCGCGTG ATCGAGGGGC GTGCCCACAT CGACCAATCC
ATGTTGACGG GCGAGCCATT GCCTGTCACC AAAGGGCAGG GCGATGAGGT CGTCGGCGGT
ACGGTCGATC AGGATGGACG GCTGGTGATC GAGGCGACCT CGGTTGGTCG TGATACCGTT
CTGGCTCAGA TCATCAAGCT GGTTGAAAAT GCGCAGACGG GCAAGCTGCC GATACAGGGT
CTGGCTGATC GCGTTGTTCG CGTGTTTACA CCCGTTGTGC TGGCCATTGC CCTGATTACC
TTCATTACCT GGATTGTATT AACCGGCAAT GTCAGTGTGG CTCTTGTCGC TGCTGTCGCC
GTGCTGGTGG TCGCCTGTCC CTGCGCCATG GGGTTGGCAA CGCCCGCTGC CATTATGGTG
GGCACGGGGC GTGCGGCAGA GTTGGGTGTG CTATTTCGCA AAGGCGAAGC ATTGGAAACG
CTTTCCCATG TGGATACGGT TCTGTTTGAT AAAACGGGCA CATTGACCGA AGGACGGCCG
ACTTTATCGG ATATCGGCGG CCCATCGCCC GATGAAGCCC TTCGTATGGC GGCTGCTCTT
GAAGGGGGAT CCGAGCATCC TCTGGGGCGA GCCATTGTGA TTGCCGCTGA TCAGCGCAAA
CTCATTTTGC CTATTGCTGA AGATTTTCGC TCTATTGCCG GTTATGGCAT AGAAGGCATG
ATTGAAGGGC ACAAGGTGCG TGTCGGTTCC CGCCATTTTC TTGAACGTGA GAGCGTGGAT
CTCGGCTCGA ATCCCACAGA AGTCGCTCAA TTAGAAGAAG CTGGTCATAC GGCCGTATTT
GTCTCATCGG ATAATTTGTT TCTCGGCTGG CTGGCGATTG CGGATCGACT TAAACCGGAA
GCAAAAAGCG TGGTTGATGC CTTGCGCCAG CGGGGTATCA AGATCGCCAT GGTGACCGGC
GATGCAAAGC GAACCGCTCA AACGGTTGCC GCGCTATTGG GTATCGATGA AGTGCACGCA
GAAATTCGCC CACAGGATAA GGCCAGGGTG GTTAGCGAAC TTCAATCCAA GGGACGTCGC
GTTGCATTCG TTGGTGACGG TATCAATGAT GCACCTGCAT TAGCTCAAGC AGATGTTGGC
ATTGCGCTGG CTTCGGGAAC AGATATCGCC ATCGAGGCGG CTGATGTCAC GCTCACACGC
GGCCAATTGC GTGAGGTGGT TACGGCAATA ACCGTCGCGC GACACACCTT ATCCAATATT
CGCGGCAATC TATTCTGGGC ATTTTTCTAC AATATTCTCT TGATACCAAT TGCTGCGGGC
GTTGCCGTTT CGATCGGCAT TCATCTCAAT CCAATGGTGG CCGGGGTGGC AATGGGCTTG
TCCTCGATAT TCGTGTTGGG GAACAGTCTT CGTCTCAAGG GACTCAAAGC ATTCCAACCA
GTTCCAATCA CCCAATCAAC CAATATCCCG ACTCACCCCA TAACCTAG
|
|---|
| Protein sequence | MKLIDLYIRI DGMTCASCSA RVERGLAKLP GVAAASVNLA TEQATIQFDP QQIRTTDLIE
VIRDVGYAPV VAEIDLAIEG MTCASCVGRV ERALKRLPAV VDAVVNLATE RAHVRYIPAM
IEPNELIAAV TEAGYGASLV DGFADGHSDG VKSDDNRQQE SLSAMKRDVI LAAGFSLGIM
FLSMGAMFIP EFERVMDGIS PFPNFWDWVQ LSLASVVLFG PGRRFFKPGF IAYRHLSPDM
NSLVATGTGA AYAYSVLVLV FPFLFPVEAR HVYFDSSAVV IAAVLAGKYL EALAKGRTSA
AIRKLIDLQA KTAHILDESG VERDVPLAQL HKGDRFVVRP GERIPTDGRV IEGRAHIDQS
MLTGEPLPVT KGQGDEVVGG TVDQDGRLVI EATSVGRDTV LAQIIKLVEN AQTGKLPIQG
LADRVVRVFT PVVLAIALIT FITWIVLTGN VSVALVAAVA VLVVACPCAM GLATPAAIMV
GTGRAAELGV LFRKGEALET LSHVDTVLFD KTGTLTEGRP TLSDIGGPSP DEALRMAAAL
EGGSEHPLGR AIVIAADQRK LILPIAEDFR SIAGYGIEGM IEGHKVRVGS RHFLERESVD
LGSNPTEVAQ LEEAGHTAVF VSSDNLFLGW LAIADRLKPE AKSVVDALRQ RGIKIAMVTG
DAKRTAQTVA ALLGIDEVHA EIRPQDKARV VSELQSKGRR VAFVGDGIND APALAQADVG
IALASGTDIA IEAADVTLTR GQLREVVTAI TVARHTLSNI RGNLFWAFFY NILLIPIAAG
VAVSIGIHLN PMVAGVAMGL SSIFVLGNSL RLKGLKAFQP VPITQSTNIP THPIT
|
|---|
| |