Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0860 |
Symbol | |
ID | 8534001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 932268 |
End bp | 933782 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646383247 |
Product | xanthine dehydrogenase, small subunit |
Protein accession | YP_003262752 |
Protein GI | 261855469 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.588743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCT TGCGCTTCCT TCTTGGGCAG GAATTGATCG AGCTCGAATC GGTCAGCCCA ACCCTGACCG TCTTAAATTA TCTACGGGAA GAGGAAAAAA GAATCGGCAC CAAGGAAGGC TGTGCCGAGG GTGACTGTGG TGCCTGCACA GTTGTAATCG CCGAAGTGGT GGATGATCGC CTGCACTACC GTGCCGTCAA TGCCTGCATC GTTTTTCTGG CGACGCTGGA CGGCAAGCAA CTCTTGACGG TCGAAGACCT CAAGACGGCG CGCAATGAGT TGCACCCGGT GCAGCAATCA ATGGTGGAGA GTCATGCCTC GCAATGTGGG TTTTGCACAC CGGGGTTTGT CATGTCGGGA TTCGCCGAAT ATCAAAACAG GCTGCACACG CTCGATGATC TGCCGGAACC CCAGTCGGAC GAAGCGGCAA CAACACACCT CACGCAAGTT TTCGCGGGCA ATCTGTGCCG CTGCACCGGC TACGGCCCGA TCATCGAGGC AGGGAAGTCC TGGCTGAACC AAGCGGATAA AACAAACCAA CAAGCTATGA CCGAAGCGGA AGCGAAGGTC ATTGCCCAAC TCAAGGCAAT TCAGCCCCAA GTCAGCAAAA CGCTGATCCA GGCCGGCCAA ACCTATATTC AACCGAATAC CATTCCGGCA CTGGCCGATG CCCTCGCCAA AACGCCGGGC GCTACCCTTT TGGCAGGCGG AACCGATATC GGCCTGTGGG TCACAAAACA GCACAGGGCT CTAGACACGG TGATCTATCT TGGCGGCATT CAGGCGCTCA AGCGGATCGA GGTTCGGGAC GGCCAGCTCG AAATCGGCGC GGCCGTCACC TACTCCGAGG CTTTACCAGT GCTGATTCGG CATTTCCCTT GGCTTGAGGA ATATCTGTAC CGCCACAGCT CGACCCAGAT TCGCAACTCC GGCACCGTTG TCGGCAACAT CGCCAACGGC TCACCCATCG GCGACATGCC GCCGGTGCTG ATTGCGCTGA ATGCCGAGAT CACACTGACC CGTCAGGGCG GGCAACGCCA TCTGCCACTG GAAGATTATT TCATCGCCTA CGGCAAGCAG GATCGCCAGC CGACCGAGTT CATCGAGTGC GTCCGTATTC CTTTGTTGAA TTCGGATTCA GTCTTGATGA ACGTCTACAA AATTTCGAAG CGATTCGAGC AAGATATCTC CAGCGTCAGC GCCGCGTTCT ACATCGAACT GGACGACCAG CAACAGGTTC AGGTAGCTCG CCTGTGCTTC GGTGGCATGG CGGCCACGCC CAAGCGCGCG ACCCACTGCG AACAAGCCTT GCTGAACAAA CCGTGGACTG AAGCGACTGT TCATGCCGCC GCCGAACGAC TGGGGGTGGA TTTCACGCCA CTCAGCGATT TCCGCGCGTC CCGGGAATAC CGCCTCGCGG TGGCTGCGAA CTTGTTGAAG AAGTTTTTCA TTCAGCAGCA GAAGCCAAAC CAAGCCACTC AAATCTCCTA CACCGGAGGG CTGATCCATG CATGA
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Protein sequence | MNTLRFLLGQ ELIELESVSP TLTVLNYLRE EEKRIGTKEG CAEGDCGACT VVIAEVVDDR LHYRAVNACI VFLATLDGKQ LLTVEDLKTA RNELHPVQQS MVESHASQCG FCTPGFVMSG FAEYQNRLHT LDDLPEPQSD EAATTHLTQV FAGNLCRCTG YGPIIEAGKS WLNQADKTNQ QAMTEAEAKV IAQLKAIQPQ VSKTLIQAGQ TYIQPNTIPA LADALAKTPG ATLLAGGTDI GLWVTKQHRA LDTVIYLGGI QALKRIEVRD GQLEIGAAVT YSEALPVLIR HFPWLEEYLY RHSSTQIRNS GTVVGNIANG SPIGDMPPVL IALNAEITLT RQGGQRHLPL EDYFIAYGKQ DRQPTEFIEC VRIPLLNSDS VLMNVYKISK RFEQDISSVS AAFYIELDDQ QQVQVARLCF GGMAATPKRA THCEQALLNK PWTEATVHAA AERLGVDFTP LSDFRASREY RLAVAANLLK KFFIQQQKPN QATQISYTGG LIHA
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