| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0831 |
|---|
| Symbol | |
|---|
| ID | 8533972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 903191 |
|---|
| End bp | 903781 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 646383218 |
|---|
| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
|---|
| Protein accession | YP_003262723 |
|---|
| Protein GI | 261855440 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGC ACGATTCATC ATCAGTCTAC ACAACAGTGC CTTTGGAATC AGTCCTGACG
AACCCTATCG CCTCAGGACT ATACCGCTGG AGTCGGCGGC TGGATTGGTT TATTGAAAAA
ATCAGCCAGT CCGTCGCATG GCTCACTCTG GTTCTTGTAC TGCTGGTGGC CTTTGACGTC
GGAGCCCGTT ATCTGTTTCA CCGCAGCTGG GTGGCTGAAC AAGAACTGGA ATGGCACATA
CTGGCTGTCA TCGCCATGAT GGCAGCTGCC TATACCCTGC AACAGGGAGA GCACGTCCGT
GTAGATGTTT TCTACCAGTA CTACAGCGAC CGGGTGAAAA TGTGGATGGA CGCCCTGTTT
CCACTTCTAA TCGTAATTCC CGTCGGTTTA ACCATAGCGT TCATGTCCGT TCATTTTTTT
CAGATGGCTT ATGCCATTGG TGAAGGCTCG CCCGACCCGG GCGGGTTGCC GTATCGATGG
GTCATTAAAG CGTTTATTCC GTTGGGATTC CTTCTCGTCT CACTTCAAGG GGTCGTCATG
ACCATTCAGG CCTTTGTTCA CCTATATCAG CACGATAAGT CAGAGAAATA A
|
|---|
| Protein sequence | MTEHDSSSVY TTVPLESVLT NPIASGLYRW SRRLDWFIEK ISQSVAWLTL VLVLLVAFDV
GARYLFHRSW VAEQELEWHI LAVIAMMAAA YTLQQGEHVR VDVFYQYYSD RVKMWMDALF
PLLIVIPVGL TIAFMSVHFF QMAYAIGEGS PDPGGLPYRW VIKAFIPLGF LLVSLQGVVM
TIQAFVHLYQ HDKSEK
|
|---|
| |