| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0823 |
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| Symbol | |
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| ID | 8533964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 893595 |
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| End bp | 894470 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383211 |
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| Product | CRISPR-associated protein, Csd2 family |
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| Protein accession | YP_003262716 |
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| Protein GI | 261855433 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02589] CRISPR-associated protein, Csd2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.582934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGA CCAACCGCTA TGACTTCGTG CTGCTGTTCG ACGTTAAAGA TGGCAACCCC
AATGGTGACC CGGATGCCGG AAACCTGCCG CGTATGGATG CGGAAACCGG TCATGGGCTA
ATGACTGATG TGTCCTTGAA GCGCAAAGTG CGTAACTTTG TTGGCATAGC AAAGGGTGAA
CAGCCACCCT ATGAAATCTA TGTGAAGGAA AAAGCCATCC TCAATAATCA GCACAAGCGC
GCCTACGTGG GCATTGGGCG TGAAGAGTTG CTAGCGGGCG ATGACAAAAA ACGCAAAGGT
GGTGACGCAG TGGACGATGC CCGACAGTGG ATGTGCCGCA ACTTCTTCGA CGTGCGCACC
TTCGGCGCGG TGATGTCAAC CGGTATCAAC TGTGGTCAAG TGCGCGGGCC GGTACAGCTT
ACCTTTGCCC GTTCCATCGA CCCCATCATT GCACAAGAAC ATTCAATAAC AGTCTGCGCG
GCCAGAAAGG AAGACAAACC CATTGAAGAA CAGATTGGCA TTCAAGGTCG CAAACATACC
GTGCCTTACG GGCTTTACAT GGCGCACGGT TTTATTTCAA GTTTTCTCGC CAAGCAAACC
GGCTTTTCAG AAGACGATCT GGAATTGCTC TGGCAGGCAC TGACGCAAAT GTTTGAACAC
GACCGCTCCG CCGCACGCGG CGAAATGACA ACGCGCGGAT TATATGTATT CAAGCACGAT
TCAGAACTCG GCAATGCACC TGCCCATGCC CTATTCGAGC GCATCCAGCC TAAACTGAAA
CCAGGGATCA GCGTGCCTCG TAACTTTACC GACTATGAAG TGTGGGTAGA TGAGGCGGAT
TTTCCGGCTG GCGTGACCTT GCTGAAAAAA TTCTGA
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| Protein sequence | MSLTNRYDFV LLFDVKDGNP NGDPDAGNLP RMDAETGHGL MTDVSLKRKV RNFVGIAKGE
QPPYEIYVKE KAILNNQHKR AYVGIGREEL LAGDDKKRKG GDAVDDARQW MCRNFFDVRT
FGAVMSTGIN CGQVRGPVQL TFARSIDPII AQEHSITVCA ARKEDKPIEE QIGIQGRKHT
VPYGLYMAHG FISSFLAKQT GFSEDDLELL WQALTQMFEH DRSAARGEMT TRGLYVFKHD
SELGNAPAHA LFERIQPKLK PGISVPRNFT DYEVWVDEAD FPAGVTLLKK F
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