| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0783 |
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| Symbol | |
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| ID | 8533921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 845311 |
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| End bp | 846792 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646383170 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003262679 |
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| Protein GI | 261855396 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.436637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCAT CAGGTGATCT GCGATTGAAC TTCAAAACCC TTTACCCAAG GCAAATTACC
GCAGGCATAT CGGCTGCCTT GATCCTTTCC GGGTGCGCGG CAGTCGGTCC GGATTACCAG
AAGCCGACGG TTCCCGTACC GAAAAACTGG CAATCGCCAA TAGTAAACGC ATCGCCACCG
AGCGTTGATG ACGCCGGGCT GGCTCGTTGG TGGCGCGAAT TCCATGACCC GGTTCTGGAT
CGGTTGATTG AGCGAGCGCT GGCCAACAAC AAGAATCTGA AACAGGCAGA AGCCCGTCTG
CTTGAAGCCC GTGCTCGGCG CGGGTTTGCC GAGGCGGATC GATTCCCGAC ACTCGGAACA
AACGCTTCGG CCAACCGCAT TGGCAGCAGT CAAGAGCTGG GTTCTGGGCT TATCAATAAT
CAGTACACCG CCGGTTTCGA TGCCCGCTGG GAAATGGATA TCTTTGGCGG AAAACGACGT
GCTCTTGAAG CGGCCTCAGC ACAAGTGGAG GCAAGTGAAG CCGATCTGTC CGCCGTTCAG
ACCAGTCTCA CGGCCGAGGT GGGTGTCAAC TACCTGAATC TGCGCGCCTT TGCGGCAAGG
CTTGCTGTTG CCGAGGCCAA TCTCGCCATC CAGACGCAAA CCCGCGATTT GGCTCAATGG
CGCTATCAGG CGGGTTTGAC CAGTCGTCTC GACTTGGAAC AGGCCACTTC CGCGCTGGAA
CAGACCCGTG CCCAGATTCC CGTGCTGGAG ACCAACCTTG CCCAAACCAA GAACCAGATT
GCGATACTGC TCGGCATCAA CCCCGAAGAC CTGCCCCCAT TCGCCACCGC GCCGATTCCC
CAGGCTGATG CCATGATGAA TACGGGTATT CCTGCCGATC TGCTCCGTCG TCGGCCCGAT
ATTCGCCGGG CAGAACGGCA ATTGGCCGCG CAAACCGCCC AAATCGGTGT GGCAACGGCT
GCCCAGTACC CTGACTTCTC TCTGGCGGGC AGTATCGGTC TGGCTTCTTT GGCCTCAGGC
AACCTGTTCA CGGCGGGAGC CAAAACCTTT TCGATCGGCA GTAATGCCGC CTGGACGCTT
TTCGATGCCG GTCGGATTCA TCAGAACATC CAGATCCAGA ATGCCCTGCA GGCGCAGGCC
CTGGCTCAAT ACGAATCTAC CGTACTGACG GCGTTTGCCG AAGTGGAAAA CGCTCTGATT
TCATACGCGC GCGAACAAGA GCGTCGTGCC GCATTGACCA GAGCAGTCGC CGCAGCCCAG
AGTGCACAAG CGCTCGCTCA AAGCCAATAT GCCGCAGGCC TCATTGATTT TCAGTCCGTG
CTCGATACGC AACGAAGCTT GTTGACCCTG CAGGATTTGC TCACCACCAG TGAAGCGGCC
GTCAGCACAA GTTTGATTCA ACTCTATAAA GCCCTGGGTG GAGGCTGGGT CGCGAACCCA
CCTGCCGCTG ACCTCACTTC TTCTTCGGAG ATCACGCCAT GA
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| Protein sequence | MRPSGDLRLN FKTLYPRQIT AGISAALILS GCAAVGPDYQ KPTVPVPKNW QSPIVNASPP
SVDDAGLARW WREFHDPVLD RLIERALANN KNLKQAEARL LEARARRGFA EADRFPTLGT
NASANRIGSS QELGSGLINN QYTAGFDARW EMDIFGGKRR ALEAASAQVE ASEADLSAVQ
TSLTAEVGVN YLNLRAFAAR LAVAEANLAI QTQTRDLAQW RYQAGLTSRL DLEQATSALE
QTRAQIPVLE TNLAQTKNQI AILLGINPED LPPFATAPIP QADAMMNTGI PADLLRRRPD
IRRAERQLAA QTAQIGVATA AQYPDFSLAG SIGLASLASG NLFTAGAKTF SIGSNAAWTL
FDAGRIHQNI QIQNALQAQA LAQYESTVLT AFAEVENALI SYAREQERRA ALTRAVAAAQ
SAQALAQSQY AAGLIDFQSV LDTQRSLLTL QDLLTTSEAA VSTSLIQLYK ALGGGWVANP
PAADLTSSSE ITP
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