| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0775 |
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| Symbol | |
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| ID | 8533913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 833167 |
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| End bp | 835332 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646383162 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003262671 |
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| Protein GI | 261855388 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTAG ATTTTCAACC CATTATCGAA TCGAGAATGC ATGATCCGTT TTCCTTGCTA
GGCCGCCATC CACTTGGCGA GGGCAAATGC CGCTTTCACA CCTACCAGCC GCAGGCCGAA
CACATCAGGA TATTGAGCAC TCATGGCGAG TGGCTTGAAT TGACAGCCGA TGCCGACTTC
CCCGGTGTAT TTGCTGGGCT CTTCACCGAG GACTTGCTGC CTCTTCACCC GGTTCTGGAA
ATCGAAACTG CTGAACACCA CAAGTACCAG ATCACGGATC CCTACAGCTT CGGGCCAGTA
CTCGGCGAAC TCGACTTGTA CTTATTCGGC GAAGGCAAGC ACTACGACCT GTGGAAAGTG
CTGGGCGCAC ATGTCATCAC CATTGACGGC GTGGAGGGCG TAACATTCGC CGTATGGGCT
CCCAATGCCA GCCGCGTCAG CGTCGTGGGC GATTTCAACA ACTGGGATGG CCGCCGCCAT
CCGATGCGCA ATCGCATCAG TAGTGGCGTT TGGGAGTTGT TTATCCCGGG CCTTTCTGCC
GGCGATTTTT ATAAGTTTGA AATCAAAAAC AGAGATACTC AGGCCACCAG CGTTCGCACT
GATCCCTTTG GCCGCAGCTT TGAACTTCGC CCCAATACGG CCGCCAAGGT AGTCAGTGAC
GAAGAATTCC AGTGGACGGA TCAATTCTGG CTCAAGGCGC GCGAGCAAAA CGACTGGATG
CACGCCCCGA TGAATGTCTA TGAAGTTCAC TTAGGTTCTT GGAAACTGAC GGGCAAACAA
TTCCCAACCT ACGCGGAATT GGCGGAGCAA CTGATTCCGT ATGTTAAAGA GCGCGGTTAC
ACTCACATTG AATTGCTGCC CATCACGGAG CACCCCTTCG ATGGCTCATG GGGTTATCAA
ACCACAGGCT ATTTCGCGCC GACCTCCCGT TTCGGCACGC CGGAACAATT CAAGCAGTTC
GTCAACAAGG CACACGAAGC AGGCATAGGC ATTATTCTTG ACTGGGTTCC GGCTCACTTT
CCCCGCGATG AGTTTGCCCT CGCCCGCTTC GATGGCACGG CACTTTATGA GCACGAGGAC
CCAAGGCGCG GGGAACACCG TGACTGGGGT ACCCTGATCT TCAATTACGG GCGCAAGGAG
GTCAGCAATT TTTTGATTGC TTCCGCCCTG TACTGGCTCG AAGAAATGCA TCTCGATGGC
CTGCGTGTCG ATGCTGTGGC ATCCATGCTG TATCTCGATT ATTCACGCGA ACATGGCGAT
TGGCTGCCGA ACGCCTACGG CGGGCGCGAA AACTTGGAGG CCATTGATTT TCTTCGTGCA
CTGAACCATG TGACACAAAG CCGGAACCCC GGCGCCTTGA TGATGGCGGA AGAATCCACC
GCCTGGCCAT TGGTGTCCAG GCCGCCCGAG GTCGGCGGGC TTGGATTCGC ATTGAAATGG
AACATGGGCT GGATGAATGA CACGCTGAAA TACTTTCAGG AAGACCCCAT CAACCGGCAA
TATCACCACA ACAATCTTAC ATTCGGCCTG CTCTACACCT TCACGGAGAA CTTCGTCCTT
CCCTTTTCGC ACGATGAAGT CGTGCATGGT AAAGGCTCGT TGCTGAACAA AATGCCCGGT
GACGAATGGC AGAAATTCGC CAATCTTCGC CTTCTTCTGG CCTACCAATG CGCCTATCCA
GGAAAGAAAC TCCTGTTCAT GGGCTGCGAA TTCGGCCAGG GCAACGAGTG GAATCATGCC
AAGCAACTCG ACTGGTGGAT GCTTGAATAC AAACTCCATC AAGGCATCAG TCAACTCAGC
ACGGCACTCA ATCACCTCTA TAAAAATGAA GTGGCACTGC ATTACCATGA TTTTGAAGGA
TGCGGGTTTT CATGGAACGA CTGTAACGAC CGCCAGAACT CAGTCATCAG TTTTTTCAGG
CACGCCAAAG GCCAGAGCAT CCTGACCATA CTTAATTTCA CGCCCGTCGT CAGACAGAAC
TACAAAATCG GCATACCGAA TACCGACCGG TTGAATATAG TATTCAATTC CGACGAGTCT
GTTTATGGCG GCTCAGCCAC CGCATTGGAA TTAACTCACC ACAAAAACAG TCCTTATAAT
GGTCAAAGTG GCCATATAGA ACTGACACTA CCGCCACTTG GCGCCCTGAT GATCAGAATA
AATTGA
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| Protein sequence | MQLDFQPIIE SRMHDPFSLL GRHPLGEGKC RFHTYQPQAE HIRILSTHGE WLELTADADF
PGVFAGLFTE DLLPLHPVLE IETAEHHKYQ ITDPYSFGPV LGELDLYLFG EGKHYDLWKV
LGAHVITIDG VEGVTFAVWA PNASRVSVVG DFNNWDGRRH PMRNRISSGV WELFIPGLSA
GDFYKFEIKN RDTQATSVRT DPFGRSFELR PNTAAKVVSD EEFQWTDQFW LKAREQNDWM
HAPMNVYEVH LGSWKLTGKQ FPTYAELAEQ LIPYVKERGY THIELLPITE HPFDGSWGYQ
TTGYFAPTSR FGTPEQFKQF VNKAHEAGIG IILDWVPAHF PRDEFALARF DGTALYEHED
PRRGEHRDWG TLIFNYGRKE VSNFLIASAL YWLEEMHLDG LRVDAVASML YLDYSREHGD
WLPNAYGGRE NLEAIDFLRA LNHVTQSRNP GALMMAEEST AWPLVSRPPE VGGLGFALKW
NMGWMNDTLK YFQEDPINRQ YHHNNLTFGL LYTFTENFVL PFSHDEVVHG KGSLLNKMPG
DEWQKFANLR LLLAYQCAYP GKKLLFMGCE FGQGNEWNHA KQLDWWMLEY KLHQGISQLS
TALNHLYKNE VALHYHDFEG CGFSWNDCND RQNSVISFFR HAKGQSILTI LNFTPVVRQN
YKIGIPNTDR LNIVFNSDES VYGGSATALE LTHHKNSPYN GQSGHIELTL PPLGALMIRI
N
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