| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0751 |
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| Symbol | |
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| ID | 8533888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 810295 |
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| End bp | 811803 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383137 |
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| Product | RNA polymerase, sigma54 subunit, RpoN |
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| Protein accession | YP_003262647 |
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| Protein GI | 261855364 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGG GACTGGAACT TCGCCTCGGG CAAAGCCTGG CAATGACACC TCAGTTGCAG
CAGTCCATCC GCTTGCTGCA ACTCTCGACG CTCGAACTGT CACTGGAAAT CCAGCAAGCC
GTTGATACCA ATCCTTTGTT GGAAATCGCC GAAACCGACG AGTTTGGTGA AAGTGGCGAG
GCCTTCAATG AAACCGGTGA AGCGGGTTCA ACCCCCGAAG CTGATTTTCA GGAAGATCCC
AATGCGGTCG CAGGCGAGGC GCTGCTGGCA CCGAACAACG AACTGACACC GGACGACCCT
TTCACGCTGG ATACCCAGTG GGAAGACTAT TACGAGGCCG ATGGCAGCAC CTCATTTAGT
GCATCCGAAC AAAACTTTGA CGACTACGAC CCGTATGCCA CCACGTCAAA CGGTGTGGAA
TCCCTGCGCG ATCATCTCTT GAGCCAGATT CACCTGACGC ACCTGACACC CCGCGATACT
GCCGTCGCCA CCGCCATCAT CGAAGCGATC GACCCGACCG GTTACCTGGC CGATTCACTT
GAAGACATCC AAGCCATGCT CAGTGAAGAC TGGCCGGACA TCGACCTCGA AGAGATCGGC
ACCATCCTCC ATCTGGTGCA ATCACTCGAT CCGGTCGGCG TGGGTGCTCG CGACCTGAAC
GAATCGCTGA GTCTGCAACT ACGTCAAAAA CCCGTCGACA CGCCTTATCT GGATATCGCT
CTTCAAATTT GCGAACGGGA CCTGATCGAG GCCATCGCGC AACGCGAGTA CACCAAGGTA
CAACGAACAC TCGGCATCGA CCAGGCCGCA CTGGAAGGCG CTCTGCTCCT TTTACAGGGC
CTGAACCCGC GGCCAGGTGC GGATGTGGGT GCAGAAGCAG CCGACTACCT CATTCCCGAT
GTGATGGTAA CGCTGCGCAA CAATGTCTGG CACGTGGATC TCAATCCGGA AATCGCCCCC
AAGTTGCGCG TCAACCAGAC CTATGCACGG ATGATCAACC GCAGTTCCCG CGGTGAAGAT
GCCAGCTACA TTCGCAGCCA TCTGCAGGAA GCGCGCTGGT TCATCAAGAG CCTGCGCAGT
CGCAACGAAA CACTACTCAA CGTCGCGAGG GCCATCGTCG CGCGACAAAC CGCCTTTTTC
GAACAAGGCG AAACCGGTAT GAAGCCGCTG GTTCTGCGGG AGATTGCAGA AGAGCTCTCC
CTGCACGAAT CCACGGTCAG CCGGGTGACC ACTCAAAAAT ACATGCTGAC CCCGCGTGGT
ACCTTCGAAT TCAAATATTT CTTTTCGAGC CACGTGGGCA CCAGCGATGG TGGCGAATGC
TCGGCTACAG CCATTCGCGC CATGATCAAA AAACTGGTGA GCGAGGAAAA TCCTCGCAAA
CCCTTGTCGG ATGCCAAAAT TGCCGACATG CTCATCGAAC AAGGCATCGA TGTCGCAAGA
CGGACGATAG CCAAGTACCG CGAGGCAATG GGCATTGCCT CGTCCACCGA CCGTAAGCGC
CTGATCTGA
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| Protein sequence | MKPGLELRLG QSLAMTPQLQ QSIRLLQLST LELSLEIQQA VDTNPLLEIA ETDEFGESGE
AFNETGEAGS TPEADFQEDP NAVAGEALLA PNNELTPDDP FTLDTQWEDY YEADGSTSFS
ASEQNFDDYD PYATTSNGVE SLRDHLLSQI HLTHLTPRDT AVATAIIEAI DPTGYLADSL
EDIQAMLSED WPDIDLEEIG TILHLVQSLD PVGVGARDLN ESLSLQLRQK PVDTPYLDIA
LQICERDLIE AIAQREYTKV QRTLGIDQAA LEGALLLLQG LNPRPGADVG AEAADYLIPD
VMVTLRNNVW HVDLNPEIAP KLRVNQTYAR MINRSSRGED ASYIRSHLQE ARWFIKSLRS
RNETLLNVAR AIVARQTAFF EQGETGMKPL VLREIAEELS LHESTVSRVT TQKYMLTPRG
TFEFKYFFSS HVGTSDGGEC SATAIRAMIK KLVSEENPRK PLSDAKIADM LIEQGIDVAR
RTIAKYREAM GIASSTDRKR LI
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