Gene Hneap_0704 details

Gene Information

• Locus tag: Hneap_0704
• ID: 8533841
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 767837
• End bp: 768388
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 646383091
• Product: positive regulator of sigma E, RseC/MucC
• Protein accession: YP_003262601
• Protein GI: 261855318
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3086] Positive regulator of sigma E activity

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCGTC AACCCCATGA TCCCTCGCGC CTGAAACAAC CAGCCATCGG TTCCGTTCCT 
TATGCAGAAC ATCGTCTGGC TGGTTTGGAA TCGAGCAAAT CAGATACCGC CGATATTCAG 
GAAGAGGGTG TTGTCGTTGC TGTTGCCGCA GATGGCGTAT GGATTGAAAC TCAGCGCCAA 
AGCGGCTGCC AGTCTTGTTC TTCCCGTGGT GGATGCGGCG TGGGCATCAT GCAGAAAGCG 
CTGAATCGTC GGCAGCACAG GGTGCGTGTA CACACTGATT TACCAGTGAA GGTTGGCGAT 
CATGTTCAAT TGCTGTTGCC CGCGGCGGCC TTGGTTCAGG CTTCTGTACT CATGTATTTG 
CTTCCACTAC TGGGGTTGAT TGTCGGCGCG ATGATAGGCC AATCCCTTTT GGCTACCGAT 
GCTGGCGCCA TCGGCGGCGC AGTGGTGGGT TTCGCTGCTG TCTTGCTGTT GATTGCGCGG 
CAGCAGAACG GACTTTCTCG CAACGGTCGT TATGCACCGC GCATTGAACG GGTTTTGTTC 
AAGTCCGCTT AG 

 

Protein sequence

MNRQPHDPSR LKQPAIGSVP YAEHRLAGLE SSKSDTADIQ EEGVVVAVAA DGVWIETQRQ 
SGCQSCSSRG GCGVGIMQKA LNRRQHRVRV HTDLPVKVGD HVQLLLPAAA LVQASVLMYL 
LPLLGLIVGA MIGQSLLATD AGAIGGAVVG FAAVLLLIAR QQNGLSRNGR YAPRIERVLF 
KSA