Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0649 |
Symbol | |
ID | 8533785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 701519 |
End bp | 702115 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646383038 |
Product | Tetratricopeptide repeat protein |
Protein accession | YP_003262549 |
Protein GI | 261855266 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAACC GGATACAGAT GAAACACCCG ACCCACGGAC TCAAAATGGG GGCAGTCGCC TTTCTTGCCA TAACCGTTGC GATGTTGGCT GGTTGCGCCG GCACGCCCCC GCCGCGCCCG AGCATGGTCA TCAAGCAGCC CCCTGTGCCG CCCTCCGTGC AGGCACACCC ACTGAACATC CCGCGATTAC AAGAAAAAAC CCTGCCGCAA TCCAATGGCA ATTCAACATC GAACACACCG CCCCAAGCGG TTCAAACAGC CAGCACCCCG GCTGTTCTGG CACTGGTATC CCGCGCCGAG ACACAAACGC AGTCCGGTGA TTTTGGCGGG GCCGAGGCCA CGTTGGAACG CGCCGTCCAG ATTCAACCGC ACAATACCCG ACTCTGGCTC GATTTTGCGC AATTGCGACT AGCCCAAAAG CAACCCGCAC AGGCCGAACA GTTCGCCCTT CGTGCCGTGC AATACGCTCA AAACAATCGG GAAGTCAGTG CCGCATGGCA GATGGTCGCA AAGACTCGAC AAGCCCAGGG CGACACAAAA GGTGCCGCCG AAGCCCGTCG CAAGGCCGGT TTCGTGCCCG GTCAGACTCA AGGCTGA
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Protein sequence | MPNRIQMKHP THGLKMGAVA FLAITVAMLA GCAGTPPPRP SMVIKQPPVP PSVQAHPLNI PRLQEKTLPQ SNGNSTSNTP PQAVQTASTP AVLALVSRAE TQTQSGDFGG AEATLERAVQ IQPHNTRLWL DFAQLRLAQK QPAQAEQFAL RAVQYAQNNR EVSAAWQMVA KTRQAQGDTK GAAEARRKAG FVPGQTQG
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