Gene Hneap_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0648 
Symbol 
ID8533784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp699454 
End bp701460 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content59% 
IMG OID646383037 
Producthelicase c2 
Protein accessionYP_003262548 
Protein GI261855265 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACACGG AAGCGGCGGA CACACTGTCC ACGGCACCTA CGCCTTCAAA ACCAAGCACG 
CTGCAAGACG TCTTTGGTGA AAGCGGGGTT CTTGCCGCTG CGTTCAGTGG TTATCAGCCG
CGCGCGGGCC AGTTGCAAAT GGCCGAGATC ATCCGCGACG CCATCACCGA TTCGCGTACC
GTCGTGATCG AAGCGGGCAC CGGGGTGGGC AAAACCTTCG GTTATCTCGC CCCGATTCTG
CTCGCCGGTC GCAAAGCGAT CGTGTCCACC GGCACCAAGC ATTTGCAGGA TCAGATCTTC
AGCCGGGACT TGCCGCAAAT CAAGCAACTG ATGGGTTCGA CCACGCGCAC GGCACTGCTC
AAAGGGCGCT CGAACTACCT GTGCCTGCAC CGCTTGGAAC GCGCGATGAC CGAAGGGCGG
CTCAAAAGCC CGGACTGGGT CACGGCGCTG CACACCATCA AGGGTTGGAG CACACGTACG
CGCGACGGCG ACATTGCCCG TTGCGATGCC GTGAGCGAAG AGCATGGCAT CTGGCCACTG
GTTACCTCCA CCAACGAGAA TTGTCTGGGC AAGGAATGCC CGGTCTTCGA TGAGTGCTTT
GTGGTGAAAG CCCGCGAGGC CGCGCATGAG GCCGATCTCG TGGTCATCAA CCATCATCTG
TTTTGCGCCG ATATTGCCAT TCGCCAGAGC GGCTTTGCCC AACTGTTGCC TGAAGCGGAT
GTGGTGGTCT TGGATGAAGC CCATCAACTG CCAGAGATCG CCAGCTTGTT TTTCGGTTCG
GCCCTCAGCA GCGGGCAGAT GATTGATCTG TTGCGCGATA TCGTGCGCGA ACAACAGGCC
GAAGCGGTAG ACATGTCCGA TCTGCTTGGC GTGGTGCATC AATTTGAATT GGCCATAGAT
CCTTGCGTTT TGGCACTGAA AAATGCCCGC ACCGACCGCA TTGCCTGGCA GGAATTGCGG
GAGGATAAAA CCATTCAAGC GGCTTTCGAT ACGCTCGAAA CCCGACTAGC CGACCTGACC
GCCGCGCTGG AACTCGCCGC GCCGCGTGGC AAGGGTTTAG CCAGCTGCCA TGAACGCGCC
ATACAAATGC GCCAATCGCT GTCGCATTTC CGCCGCAGCG AGGAAATCAC AACTGAAGTC
CGCTGGCTCG AACGCCGCGA GAAATCCTTT ACCCTCAACA TCACGCCGAT GGATGCGGGC
CAAACATTCT CAGATGTGGT TGAAAGCCAG CCGCGCGCCT GGGTGTTTGC ATCAGCCACG
CTCGCTGCGG GCAAGGATTT TTCCCACTTC ACCCGCCGTT TGAATTTGAA TCTCGCGCTG
TGCCAGCAAA CACCCTCGCC CTTCGATTAT CCGAATCAGG CGATTATGTA TCTGCCACCG
AACCCGCCGG ACCCCAAAAC AGACCCCGAC TACACGCTCA AGATTTTGCG TGCCGTGTTC
CCGGTGCTCA AGGCCAGCGG CGGGCGGGCC TTTTTGCTGT TCACGAGCCA TCGCGAGCTG
AAGAAAGCCG CCGATATTTT GGAAGGCAAA CTGCCGTTTC CGTTGTTTGT GCAAGGCACG
CAGGCCAAGG CGGCCTTGCT TGAACAGTTC CGGCAATCGG GCAACGGCGT GTTGCTCGGC
ACGCAGAGTT TCTGGGAAGG CGTGGATGTG CGCGGTGAGG CGTTGTCTGT TGTGATGATC
GATCGCATCC CCTTCGCCTC GCCCGATGAC CCAGTTCGCC GCGCCCGTGA GGCACAAATC
AAGGAATCGG GTCATTCACC GTTCGCGGCC ATGGCCTTGC CCGAAGCCAT TATCACCTTC
AAACAGGGCG TGGGCCGGTT GATTCGCGAT GTCACCGACC GAGGCGTGCT CGTGCTCTGC
GACCCGCGCT TGCAGCGCAC CGGCTTTGGT CGACAAATAC TGGATGCCCT GCCGCCGATG
CGCCGCAGTC ACTCAATCGA TGAGATACAC GATTTCTTCC AATACGATCA AGCGACCAAT
GCGCTCAAGG CAAGCAAGGC AGAATAA
 
Protein sequence
MNTEAADTLS TAPTPSKPST LQDVFGESGV LAAAFSGYQP RAGQLQMAEI IRDAITDSRT 
VVIEAGTGVG KTFGYLAPIL LAGRKAIVST GTKHLQDQIF SRDLPQIKQL MGSTTRTALL
KGRSNYLCLH RLERAMTEGR LKSPDWVTAL HTIKGWSTRT RDGDIARCDA VSEEHGIWPL
VTSTNENCLG KECPVFDECF VVKAREAAHE ADLVVINHHL FCADIAIRQS GFAQLLPEAD
VVVLDEAHQL PEIASLFFGS ALSSGQMIDL LRDIVREQQA EAVDMSDLLG VVHQFELAID
PCVLALKNAR TDRIAWQELR EDKTIQAAFD TLETRLADLT AALELAAPRG KGLASCHERA
IQMRQSLSHF RRSEEITTEV RWLERREKSF TLNITPMDAG QTFSDVVESQ PRAWVFASAT
LAAGKDFSHF TRRLNLNLAL CQQTPSPFDY PNQAIMYLPP NPPDPKTDPD YTLKILRAVF
PVLKASGGRA FLLFTSHREL KKAADILEGK LPFPLFVQGT QAKAALLEQF RQSGNGVLLG
TQSFWEGVDV RGEALSVVMI DRIPFASPDD PVRRAREAQI KESGHSPFAA MALPEAIITF
KQGVGRLIRD VTDRGVLVLC DPRLQRTGFG RQILDALPPM RRSHSIDEIH DFFQYDQATN
ALKASKAE