Gene Hneap_0648 details

Gene Information

• Locus tag: Hneap_0648
• ID: 8533784
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: -
• Start bp: 699454
• End bp: 701460
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 646383037
• Product: helicase c2
• Protein accession: YP_003262548
• Protein GI: 261855265
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACACGG AAGCGGCGGA CACACTGTCC ACGGCACCTA CGCCTTCAAA ACCAAGCACG 
CTGCAAGACG TCTTTGGTGA AAGCGGGGTT CTTGCCGCTG CGTTCAGTGG TTATCAGCCG 
CGCGCGGGCC AGTTGCAAAT GGCCGAGATC ATCCGCGACG CCATCACCGA TTCGCGTACC 
GTCGTGATCG AAGCGGGCAC CGGGGTGGGC AAAACCTTCG GTTATCTCGC CCCGATTCTG 
CTCGCCGGTC GCAAAGCGAT CGTGTCCACC GGCACCAAGC ATTTGCAGGA TCAGATCTTC 
AGCCGGGACT TGCCGCAAAT CAAGCAACTG ATGGGTTCGA CCACGCGCAC GGCACTGCTC 
AAAGGGCGCT CGAACTACCT GTGCCTGCAC CGCTTGGAAC GCGCGATGAC CGAAGGGCGG 
CTCAAAAGCC CGGACTGGGT CACGGCGCTG CACACCATCA AGGGTTGGAG CACACGTACG 
CGCGACGGCG ACATTGCCCG TTGCGATGCC GTGAGCGAAG AGCATGGCAT CTGGCCACTG 
GTTACCTCCA CCAACGAGAA TTGTCTGGGC AAGGAATGCC CGGTCTTCGA TGAGTGCTTT 
GTGGTGAAAG CCCGCGAGGC CGCGCATGAG GCCGATCTCG TGGTCATCAA CCATCATCTG 
TTTTGCGCCG ATATTGCCAT TCGCCAGAGC GGCTTTGCCC AACTGTTGCC TGAAGCGGAT 
GTGGTGGTCT TGGATGAAGC CCATCAACTG CCAGAGATCG CCAGCTTGTT TTTCGGTTCG 
GCCCTCAGCA GCGGGCAGAT GATTGATCTG TTGCGCGATA TCGTGCGCGA ACAACAGGCC 
GAAGCGGTAG ACATGTCCGA TCTGCTTGGC GTGGTGCATC AATTTGAATT GGCCATAGAT 
CCTTGCGTTT TGGCACTGAA AAATGCCCGC ACCGACCGCA TTGCCTGGCA GGAATTGCGG 
GAGGATAAAA CCATTCAAGC GGCTTTCGAT ACGCTCGAAA CCCGACTAGC CGACCTGACC 
GCCGCGCTGG AACTCGCCGC GCCGCGTGGC AAGGGTTTAG CCAGCTGCCA TGAACGCGCC 
ATACAAATGC GCCAATCGCT GTCGCATTTC CGCCGCAGCG AGGAAATCAC AACTGAAGTC 
CGCTGGCTCG AACGCCGCGA GAAATCCTTT ACCCTCAACA TCACGCCGAT GGATGCGGGC 
CAAACATTCT CAGATGTGGT TGAAAGCCAG CCGCGCGCCT GGGTGTTTGC ATCAGCCACG 
CTCGCTGCGG GCAAGGATTT TTCCCACTTC ACCCGCCGTT TGAATTTGAA TCTCGCGCTG 
TGCCAGCAAA CACCCTCGCC CTTCGATTAT CCGAATCAGG CGATTATGTA TCTGCCACCG 
AACCCGCCGG ACCCCAAAAC AGACCCCGAC TACACGCTCA AGATTTTGCG TGCCGTGTTC 
CCGGTGCTCA AGGCCAGCGG CGGGCGGGCC TTTTTGCTGT TCACGAGCCA TCGCGAGCTG 
AAGAAAGCCG CCGATATTTT GGAAGGCAAA CTGCCGTTTC CGTTGTTTGT GCAAGGCACG 
CAGGCCAAGG CGGCCTTGCT TGAACAGTTC CGGCAATCGG GCAACGGCGT GTTGCTCGGC 
ACGCAGAGTT TCTGGGAAGG CGTGGATGTG CGCGGTGAGG CGTTGTCTGT TGTGATGATC 
GATCGCATCC CCTTCGCCTC GCCCGATGAC CCAGTTCGCC GCGCCCGTGA GGCACAAATC 
AAGGAATCGG GTCATTCACC GTTCGCGGCC ATGGCCTTGC CCGAAGCCAT TATCACCTTC 
AAACAGGGCG TGGGCCGGTT GATTCGCGAT GTCACCGACC GAGGCGTGCT CGTGCTCTGC 
GACCCGCGCT TGCAGCGCAC CGGCTTTGGT CGACAAATAC TGGATGCCCT GCCGCCGATG 
CGCCGCAGTC ACTCAATCGA TGAGATACAC GATTTCTTCC AATACGATCA AGCGACCAAT 
GCGCTCAAGG CAAGCAAGGC AGAATAA 

 

Protein sequence

MNTEAADTLS TAPTPSKPST LQDVFGESGV LAAAFSGYQP RAGQLQMAEI IRDAITDSRT 
VVIEAGTGVG KTFGYLAPIL LAGRKAIVST GTKHLQDQIF SRDLPQIKQL MGSTTRTALL 
KGRSNYLCLH RLERAMTEGR LKSPDWVTAL HTIKGWSTRT RDGDIARCDA VSEEHGIWPL 
VTSTNENCLG KECPVFDECF VVKAREAAHE ADLVVINHHL FCADIAIRQS GFAQLLPEAD 
VVVLDEAHQL PEIASLFFGS ALSSGQMIDL LRDIVREQQA EAVDMSDLLG VVHQFELAID 
PCVLALKNAR TDRIAWQELR EDKTIQAAFD TLETRLADLT AALELAAPRG KGLASCHERA 
IQMRQSLSHF RRSEEITTEV RWLERREKSF TLNITPMDAG QTFSDVVESQ PRAWVFASAT 
LAAGKDFSHF TRRLNLNLAL CQQTPSPFDY PNQAIMYLPP NPPDPKTDPD YTLKILRAVF 
PVLKASGGRA FLLFTSHREL KKAADILEGK LPFPLFVQGT QAKAALLEQF RQSGNGVLLG 
TQSFWEGVDV RGEALSVVMI DRIPFASPDD PVRRAREAQI KESGHSPFAA MALPEAIITF 
KQGVGRLIRD VTDRGVLVLC DPRLQRTGFG RQILDALPPM RRSHSIDEIH DFFQYDQATN 
ALKASKAE