Gene Hneap_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0574 
Symbol 
ID8533709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp610822 
End bp611535 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content51% 
IMG OID646382963 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003262475 
Protein GI261855192 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0890694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCACT CATTTGATCT TGCCTCACTC TGGCAACAAA GTGATCTCAT CATCCGCAGC 
GTTGCGCTAC TTCTGTTGGC CATGTCTGTC TTGACCTGGT TCTATGTTCT ACAACGACTA
TCATTCATGT TGCGTCTGCG TGGCGTCAGT CGCCGATTCG AACAGTTCTG GCACACTCAA
GGATATTCGG AAGGCTTGGC ACTATTGGGG AAACCCGGTC ACATCAATCC GTTTCGCACG
CTTGCGGATA GCGCGGTTGA AGCGGTAGAA CATTACTACA GCCACTCAAC AGATTTGCAC
AGCCAACTTC CCTTGAGCGA GTGGCTCTCA TTATCGCTGA CGAGCAAAAT TGATGACATT
CAGGAGTTTT TCCGTCAAGG AATGAGCGCG CTAGCATCGA TTGGCGCTGT GGCCCCTTTC
ATTGGATTAT TCGGCACCGT TTGGGGGATT TATCACGCAT TGGAAAATAT TGGCCAAACC
GGATCGGCCA ATTTAGCCAC CATAGCGGGG CCTGTCGGAG AAGCCTTGGT AATGACCGCA
TTCGGGCTGG CAGTCGCCAT TCCTGCTGTG CTCGCCTACA ACGCAATCAA TAGGCAAAAT
CGACAACTCA TTGCGCGCGT GCAGCGCTTT GCTCAACAAT TACACACTTA TCATGTCAGT
GGCATCGCAC CCACTGCTCG TGCCAAAGCT AACGTGCAAC AGTGGCAGGA GTAA
 
Protein sequence
MPHSFDLASL WQQSDLIIRS VALLLLAMSV LTWFYVLQRL SFMLRLRGVS RRFEQFWHTQ 
GYSEGLALLG KPGHINPFRT LADSAVEAVE HYYSHSTDLH SQLPLSEWLS LSLTSKIDDI
QEFFRQGMSA LASIGAVAPF IGLFGTVWGI YHALENIGQT GSANLATIAG PVGEALVMTA
FGLAVAIPAV LAYNAINRQN RQLIARVQRF AQQLHTYHVS GIAPTARAKA NVQQWQE