Gene Hneap_0542 details

Gene Information

• Locus tag: Hneap_0542
• ID: 8533675
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: -
• Start bp: 580090
• End bp: 580716
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 646382929
• Product: putative cytochrome c
• Protein accession: YP_003262443
• Protein GI: 261855160
• COG category: [C] Energy production and conversion
• COG ID: [COG2863] Cytochrome c553

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAATC GAAAGTGGGT TATCGCTGCC CTATTCATGT TGTCTGCCGC TCCTCTGGCT 
ATTGCAGGGA CATCGACCAA TACAATTGGC GAAAAAATAG CCAGAAAAGG AACAGGTGAC 
GTTCCAGCCT GTGCGATATG CCACGGCGAC CACGGCGAAG GAAATCTAAA AGCTGGCTAC 
CCGAGATTGG CTGGCATGAA TGCAGAATAT CTAGATCAGC AAATGACGTT GTATGCACAA 
GAAGAGCGAA CAAACCGAAT CATGCAGGAA TATGCACAAA AGCTGAGTAT CGCGCAGCGA 
CGGGCTGTAT CGGAGTACTA CGCGAATCAG ACCGCGCATT CACCACACAT CGATCTGCAG 
AGCCTCCCAC CTCAGGCGGC GAAATTATTG CAAGTGGGTG CGCCGAATCG GGGTATACCT 
AGTTGCTTCA GCTGCCATGG AGACAACGGA CAAGGTGATG CGGATGGAAT CGCACCCATT 
GCTGGGCAAC CCGCTATCTA CTTTATCCAC CAAATGAACG CGTGGCGATT TAATGCTCGC 
CCGGTCACAG AGGGCAACCC GATGGGCGTC ATTGCGAAAT CATTAACTGT GCAGGAAATT 
TCTTTACTAG CGCATGCTCT GCAATAG 

 

Protein sequence

MNNRKWVIAA LFMLSAAPLA IAGTSTNTIG EKIARKGTGD VPACAICHGD HGEGNLKAGY 
PRLAGMNAEY LDQQMTLYAQ EERTNRIMQE YAQKLSIAQR RAVSEYYANQ TAHSPHIDLQ 
SLPPQAAKLL QVGAPNRGIP SCFSCHGDNG QGDADGIAPI AGQPAIYFIH QMNAWRFNAR 
PVTEGNPMGV IAKSLTVQEI SLLAHALQ